[HTML][HTML] Network analysis and molecular mapping for SARS-CoV-2 to reveal drug targets and repurposing of clinically developed drugs

SA More, AS Patil, NS Sakle, SN Mokale - Virology, 2021 - Elsevier
… We report on the major in–depth molecular and docking analysis by using … molecular events
involved in SARS–CoV–2. We constructed three drug–target–pathways–disease networks

Combining QTL mapping and gene co-expression network analysis for prediction of candidate genes and molecular network related to yield in wheat

J Wei, Y Fang, H Jiang, X Wu, J Zuo, X Xia, J Li… - BMC Plant …, 2022 - Springer
… In this study, we had combined QTL mapping and weighted gene co-expression network
analysis (WGCNA) to predict candidate genes related to yield in wheat. WGCNA is a systems …

Mapping molecular networks using proteomics: a vision for patient-tailored combination therapy

EF Petricoin III, VE Bichsel, VS Calvert… - Journal of clinical …, 2005 - ascopubs.org
Molecular network analysis of defined pathways can be obtained using reverse-phase protein
… After biopsy, molecular network analysis is conducted. A tumor-specific network portrait …

Comprehensive map of molecules implicated in obesity

J Jagannadham, HK Jaiswal, S Agrawal, K Rawal - PLoS One, 2016 - journals.plos.org
… To construct comprehensive molecular map of molecules … Networks pervade our lives as
exemplified by worldwide webs, internet, small world networks, electricity grids, social networks

Molecular mapping of human hepatocellular carcinoma provides deeper biological insight from genomic data

N Kittaka, I Takemasa, Y Takeda, S Marubashi… - European Journal of …, 2008 - Elsevier
… Based on network analysis, we speculated that the binding of integrins to SPP1 20 might
be related to the progression and metastasis of HCC. GPC3, a heparan sulphate proteoglycan …

QTL mapping for maize starch content and candidate gene prediction combined with co-expression network analysis

F Lin, L Zhou, B He, X Zhang, H Dai, Y Qian… - Theoretical and Applied …, 2019 - Springer
… of molecular networks, transcriptomic data, and genetic mapmapping together with
genome-wide association analysis … and co-expression network analysis suggested candidate …

[HTML][HTML] Network mapping of molecular biomarkers influencing radiation response in rectal cancer

L Poynter, D Galea, K Veselkov, A Mirnezami… - Clinical Colorectal …, 2019 - Elsevier
… data and intuitive visualization of the resulting network in order to identify areas … network
analysis of biomarkers implicated in RC radiosensitivity, with the aim of mapping key molecular

Network analyses based on comprehensive molecular interaction maps reveal robust control structures in yeast stress response pathways

E Kawakami, VK Singh, K Matsubara, T Ishii… - NPJ systems biology …, 2016 - nature.com
… Using the comprehensive maps constructed in this study, we searched for network motifs …
In summary, network motif analyses applied to the detailed molecular interaction maps

The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology

F Chalmel, M Primig - BMC bioinformatics, 2008 - Springer
… In order to address these issues and to allow for integrated exploration of different types of
data we have developed the Annotation, Mapping, Expression, and Network (AMEN) program …

Functional network analysis reveals extended gliomagenesis pathway maps and three novel MYC-interacting genes in human gliomas

M Bredel, C Bredel, D Juric, GR Harsh, H Vogel… - Cancer research, 2005 - AACR
… Our network analysis has also revealed an extended pathway map potentially involved in
glioblastoma cell invasion. The invasion of neoplastic cells into normal surrounding brain …