Deep-learning-based automated neuron reconstruction from 3D microscopy images using synthetic training images

W Chen, M Liu, H Du, M Radojević… - … on Medical Imaging, 2021 - ieeexplore.ieee.org
… quent neuron reconstruction process. To our best knowledge, deep-learning based neuron
reconstruction … In [51], deep reinforcement learning is employed for neural tracking in 2D …

Deep learning segmentation of optical microscopy images improves 3-D neuron reconstruction

R Li, T Zeng, H Peng, S Ji - IEEE transactions on medical …, 2017 - ieeexplore.ieee.org
… varieties of neuron morphologies among samples, we adopt residual learning and inception
learning to build the deep network containing multi-scale information of neural structures. …

DeepNeuron: an open deep learning toolbox for neuron tracing

Z Zhou, HC Kuo, H Peng, F Long - Brain informatics, 2018 - Springer
… Using the trained models, we filtered out falsely detected signals and pruned the reconstructed
neuronal tree. Furthermore, different tracing results generated from multiple base tracing …

3D neuron reconstruction in tangled neuronal image with deep networks

Q Li, L Shen - IEEE transactions on medical imaging, 2019 - ieeexplore.ieee.org
… Our purpose is to reconstruct neurons in tangled neuronal images via … neuron segmentation
with deep networks. We introduce briefly image segmentation works based on deep learning

Weakly supervised learning of 3D deep network for neuron reconstruction

Q Huang, Y Chen, S Liu, C Xu, T Cao, Y Xu… - Frontiers in …, 2020 - frontiersin.org
… of deep learning-based methods for various optical neurondeep learning method for
automatic neuron reconstruction. A 3D deep residual CNN was employed for accurate neuron

Phase recovery and holographic image reconstruction using deep learning in neural networks

Y Rivenson, Y Zhang, H Günaydın, D Teng… - Light: Science & …, 2018 - nature.com
Deep learning has recently been applied to solving inverse problems in imaging science …
In this work, we used deep learning to rapidly perform phase recovery and reconstruct complex-…

Quality Control of Neuron Reconstruction Based on Deep Learning

D Lu, S Zhao, P Xie, K Ma, L Liu, Y Zheng - arXiv preprint arXiv …, 2020 - arxiv.org
… To ensure the quality of reconstructed neurons and provide guidance for annotators to … ,
we propose a deep learning based quality control method for neuron reconstruction in this paper…

[HTML][HTML] SPECTnet: a deep learning neural network for SPECT image reconstruction

W Shao, SP Rowe, Y Du - Annals of Translational Medicine, 2021 - ncbi.nlm.nih.gov
… The present study is to develop a deep learning technique for SPECT image reconstruction
that … training method specifically applicable to medical image reconstruction is presented. …

Deep learning for tomographic image reconstruction

G Wang, JC Ye, B De Man - Nature machine intelligence, 2020 - nature.com
… introduced a similar convolutional neural network (CNN) for low-dose CT denoising. In the
deep learning methods were also proposed for MR reconstruction such as variational neural

Learning hierarchical and shared features for improving 3D neuron reconstruction

H Yuan, N Zou, S Zhang, H Peng… - 2019 IEEE International …, 2019 - ieeexplore.ieee.org
… pipeline to perform automatic neuron reconstruction. In this work, we propose a deep
learning approach for improving the accuracy of 3D neuron reconstruction. First, we propose to …