Using atomic force microscopy to study chromatin structure and nucleosome remodeling

D Lohr, R Bash, H Wang, J Yodh, S Lindsay - Methods, 2007 - Elsevier
… in template occupation, nucleosome stabilities, nucleosome locations and the effects of …
array nucleosomes to the action of the human Swi-Snf ATP-dependent nucleosome remodeling

[HTML][HTML] Using atomic force microscopy to study nucleosome remodeling on individual nucleosomal arrays in situ

H Wang, R Bash, JG Yodh, G Hager, SM Lindsay… - Biophysical journal, 2004 - cell.com
… , we have utilized an atomic force microscopy in situ … nucleosome remodeling. This direct
approach was used to look for changes induced by the action of the human Swi-Snf remodeling

[HTML][HTML] Atomic force microscopy imaging of SWI/SNF action: mapping the nucleosome remodeling and sliding

F Montel, E Fontaine, P St-Jean, M Castelnovo… - Biophysical journal, 2007 - cell.com
force microscopy) and theoretical study of the structural and dynamical properties of
nucleosomes… DNA-complexed length distribution and nucleosome position in various contexts. …

RSC remodeling of oligo-nucleosomes: an atomic force microscopy study

F Montel, M Castelnovo, H Menoni… - Nucleic acids …, 2011 - academic.oup.com
… properties of the nucleosome due to the remodeling and sliding … , where the nucleosome is
remodeled (change of complexed … In this work, by using atomic force microscopy (AFM), we …

Dynamics of nucleosomes revealed by time-lapse atomic force microscopy

LS Shlyakhtenko, AY Lushnikov, YL Lyubchenko - Biochemistry, 2009 - ACS Publications
… atomic force microscopy (AFM) imaging to directly visualize the dynamics of nucleosomes
… action of remodeling proteins as well as other intracellular systems in chromatin dynamics. …

Probing the structure and dynamics of nucleosomes using atomic force microscopy imaging

MP Stumme-Diers, T Stormberg, Z Sun… - JoVE (Journal of …, 2019 - jove.com
nucleosome particles at the single-molecule level using static and time-lapse atomic force
microscopy (… Furthermore, special proteins termed remodeling factors have been shown to …

Nanoscale nucleosome dynamics assessed with time-lapse AFM

YL Lyubchenko - Biophysical reviews, 2014 - Springer
… , such as transmission electron microscopy (TEM) and atomic force microscopy (AFM),
were … How do remodeling factors interact with nucleosomes? These are a few fundamental …

Direct imaging of human SWI/SNF-remodeled mono-and polynucleosomes by atomic force microscopy employing carbon nanotube tips

GR Schnitzler, CL Cheung, JH Hafner… - … and cellular biology, 2001 - Am Soc Microbiol
… In the first, the remodeling complex repositions nucleosomes … /SNF-remodeled products by
using atomic force microscopy (… tip that is attached to a force-sensing cantilever. AFM allows …

Dynamics of nucleosomes assessed with time-lapse high-speed atomic force microscopy

A Miyagi, T Ando, YL Lyubchenko - Biochemistry, 2011 - ACS Publications
remodeling factors accommodating the nucleosome could be positively charged to facilitate
… High-speed atomic force microscopy reveals structural dynamics of α-synuclein monomers …

Dynamics of Nucleosomal Structures Measured by High‐Speed Atomic Force Microscopy

AJ Katan, R Vlijm, A Lusser, C Dekker - Small, 2015 - Wiley Online Library
… and position of nucleosomes is highly regulated by chromatin remodeling complexes. …
dynamics of nucleosomes and tetrasomes by high-speed atomic force microscopy. We find that …