Oxford Nanopore MinION sequencing and genome assembly

H Lu, F Giordano, Z Ning - Genomics, Proteomics and …, 2016 - academic.oup.com
… Flow of Oxford Nanopore sequencing process A. Library preparation schematic for the
genomic DNA sequencing kit (SQK-MAP-003). B. 512 channels with different levels of activity in a …

Oxford Nanopore announcement sets sequencing sector abuzz

O Nanopore - Nat. Biotechnol, 2012 - nature.com
… , UK startup Oxford Nanopore Technologies took the sequencingnanopore sequencing
platforms (the GridION and MinION) capable of delivering high-throughput, ultra-long sequence

The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community

M Jain, HE Olsen, B Paten, M Akeson - Genome biology, 2016 - Springer
Nanopore DNA strand sequencing has emerged as a competitive, portable technology. …
We summarize key technical features of the Oxford Nanopore MinION, the dominant platform …

Oxford Nanopore sequencing: new opportunities for plant genomics?

K Dumschott, MHW Schmidt, HS Chawla… - Journal of …, 2020 - academic.oup.com
… DNA sequencing was dominated by Sanger’s chain … progressively supplanted by new
sequencing technologies that can … -read sequencing technologies (third-generation sequencing) …

Oxford nanopore sequencing in clinical microbiology and infection diagnostics

D Sheka, N Alabi, PMK Gordon - Briefings in bioinformatics, 2021 - academic.oup.com
sequencing technology. In the context of bringing diagnostics closer to the point of care, we
examine the current state of Oxford Nanopore … and accuracy of ONT sequencing is now such …

A first look at the Oxford Nanopore MinION sequencer

AS Mikheyev, MMY Tin - Molecular ecology resources, 2014 - Wiley Online Library
… We used two of the library preparation kits provided by Oxford Nanopore, genomic DNA,
and amplicon sequencing kits. The former was used to sequence the lambda phage genome (…

Performance of neural network basecalling tools for Oxford Nanopore sequencing

RR Wick, LM Judd, KE Holt - Genome biology, 2019 - Springer
… Basecalling, the computational process of translating raw electrical signal to nucleotide
sequence, is of critical importance to the sequencing platforms produced by Oxford Nanopore

Nanocall: an open source basecaller for Oxford Nanopore sequencing data

M David, LJ Dursi, D Yao, PC Boutros… - …, 2017 - academic.oup.com
… The highly portable Oxford Nanopore MinION sequencer has enabled new applications
of genome sequencing directly in the field. However, the MinION currently relies on a cloud …

[HTML][HTML] Assessing the performance of the oxford nanopore technologies minion

T Laver, J Harrison, PA O'neill, K Moore… - Biomolecular detection …, 2015 - Elsevier
… the first commercially available sequencer that uses nanopores. Nanopore sequencing has
been … Nanopore sequencing does not rely on sequencing by synthesis as most current major …

Is Oxford Nanopore sequencing ready for analyzing complex microbiomes?

LJ Kerkhof - FEMS microbiology ecology, 2021 - academic.oup.com
… in Oxford Nanopore (Oxford; sequencing technology that … Specific issues being addressed
are the increase in sequence … modest additional equipment needs for sequencing in the field. …