Convergent evolution in SARS-CoV-2 spike creates a variant soup from which new COVID-19 waves emerge

D Focosi, R Quiroga, S McConnell… - International journal of …, 2023 - mdpi.com
The first 2 years of the COVID-19 pandemic were mainly characterized by recurrent
mutations of SARS-CoV-2 Spike protein at residues K417, L452, E484, N501 and P681 …

A review on evolution of emerging SARS-CoV-2 variants based on spike glycoprotein

N Ghosh, S Nandi, I Saha - International immunopharmacology, 2022 - Elsevier
Since the inception of SARS-CoV-2 in December 2019, many variants have emerged over
time. Some of these variants have resulted in transmissibility changes of the virus and may …

Convergent evolution of SARS-CoV-2 spike mutations, L452R, E484Q and P681R, in the second wave of COVID-19 in Maharashtra, India

S Cherian, V Potdar, S Jadhav, P Yadav, N Gupta… - BioRxiv, 2021 - biorxiv.org
As the global severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic
expands, genomic epidemiology and whole genome sequencing are being constantly used …

Mutations and evolution of the SARS-CoV-2 spike protein

N Magazine, T Zhang, Y Wu, MC McGee, G Veggiani… - Viruses, 2022 - mdpi.com
The SARS-CoV-2 spike protein mediates target recognition, cellular entry, and ultimately the
viral infection that leads to various levels of COVID-19 severities. Positive evolutionary …

The effects of amino acid substitution of spike protein and genomic recombination on the evolution of SARS-CoV-2

L Fang, J Xu, Y Zhao, J Fan, J Shen, W Liu… - Frontiers in …, 2023 - frontiersin.org
Over three years' pandemic of 2019 novel coronavirus disease (COVID-19), multiple
variants and novel subvariants have emerged successively, outcompeted earlier variants …

E484K as an innovative phylogenetic event for viral evolution: Genomic analysis of the E484K spike mutation in SARS-CoV-2 lineages from Brazil

PAG Ferrareze, VB Franceschi… - Infection, Genetics and …, 2021 - Elsevier
The COVID-19 pandemic caused by SARS-CoV-2 has affected millions of people since its
beginning in 2019. The propagation of new lineages and the discovery of key mechanisms …

Evolutionary and structural analyses of SARS-CoV-2 D614G spike protein mutation now documented worldwide

S Isabel, L Graña-Miraglia, JM Gutierrez… - Scientific reports, 2020 - nature.com
The COVID-19 pandemic, caused by the Severe Acute Respiratory Syndrome Coronavirus 2
(SARS-CoV-2), was declared on March 11, 2020 by the World Health Organization. As of the …

Large-scale analysis of SARS-CoV-2 spike-glycoprotein mutants demonstrates the need for continuous screening of virus isolates

B Schrörs, P Riesgo-Ferreiro, P Sorn, R Gudimella… - PLoS …, 2021 - journals.plos.org
Due to the widespread of the COVID-19 pandemic, the SARS-CoV-2 genome is evolving in
diverse human populations. Several studies already reported different strains and an …

The biological and clinical significance of emerging SARS-CoV-2 variants

K Tao, PL Tzou, J Nouhin, RK Gupta… - Nature Reviews …, 2021 - nature.com
The past several months have witnessed the emergence of SARS-CoV-2 variants with novel
spike protein mutations that are influencing the epidemiological and clinical aspects of the …

[HTML][HTML] Phylogenetic relationship of SARS-CoV-2 sequences from Amazonas with emerging Brazilian variants harboring mutations E484K and N501Y in the Spike …

F Naveca, V Nascimento, V Souza, A Corado… - Virological …, 2021 - virological.org
Here we report a preliminary genomic analysis of SARS-CoV-2 B. 1.1. 28 lineage circulating
in the Brazilian Amazon region and their evolutionary relationship with emerging and …