The volume of publicly available data in biomedicine is constantly increasing. However,
these data are stored in different formats and on different platforms. Integrating these data …

The biomedical research community relies on a diverse set of resources, both within their
own institutions and at other research centers. In addition, an increasing number of shared …

The eagle-i project has been developing a semantic search portal for biomedical research
resources. A unique feature of eagle-i is that the data collection and search tools are …

We present a system for ontology based annotation and indexing of biomedical data; the key
functionality of this system is to provide a service that enables users to locate biomedical …

The volume of publicly available genomic scale data is increasing. Genomic datasets in
public repositories are annotated with free-text fields describing the pathological state of the …

Ontologies are becoming critical to e-Science, but there are challenges for the community to
find the ontologies relevant to their work, to declare mappings among related ontologies …

Background Researchers in biomedical informatics use ontologies and terminologies to
annotate their data in order to facilitate data integration and translational discoveries. As the …

As more ontologies become publicly available, finding the" right" ontologies becomes much
harder. In this paper, we address the problem of ontology search: finding a collection of …

Abstract The National Center for Biomedical Ontology (NCBO) is developing a system for
automated, ontology-based access to online biomedical resources. The system's indexing …

The range of publicly available biomedical data is enormous and is expanding fast. This
expansion means that researchers now face a hurdle to extracting the data they need from …