BioPortal: Ontologies and Integrated Data Resources at the Click of the Mouse

PL Whetzel, NH Shah, NF Noy, B Dai, M Dorf… - … on Biomedical Ontology …, 2009 - hal.science
BioPortal (http://bioportal. bioontology. org) is an open repository of biomedical ontologies
that provides programmatic and web-based access to ontologies developed in OBO, OWL …

NCBO Ontology Recommender 2.0: an enhanced approach for biomedical ontology recommendation

M Martínez-Romero, C Jonquet, MJ O'connor… - Journal of biomedical …, 2017 - Springer
Background Ontologies and controlled terminologies have become increasingly important in
biomedical research. Researchers use ontologies to annotate their data with ontology terms …

What four million mappings can tell you about two hundred ontologies

A Ghazvinian, NF Noy, C Jonquet, N Shah… - The Semantic Web …, 2009 - Springer
The field of biomedicine has embraced the Semantic Web probably more than any other
field. As a result, there is a large number of biomedical ontologies covering overlapping …

BioPortal: ontologies and data resources with the click of a mouse

M Musen, N Shah, N Noy, B Dai, M Dorf… - AMIA Annu Symp …, 2008 - academia.edu
Background Ontologies provide domain knowledge to drive data integration, information
retrieval, natural-language processing, and decision support. The National Center for …

Semantic biomedical resource discovery: a Natural Language Processing framework

P Sfakianaki, L Koumakis, S Sfakianakis… - BMC medical informatics …, 2015 - Springer
Background A plethora of publicly available biomedical resources do currently exist and are
constantly increasing at a fast rate. In parallel, specialized repositories are been developed …

Knowledge management in biomedical libraries: A semantic web approach

D Fuentes-Lorenzo, J Morato, JM Gómez - Information Systems Frontiers, 2009 - Springer
In recent years, technological advances in high-throughput techniques and efficient data
gathering methods, coupled with a world-wide effort in computational biology, have resulted …

BiOSS: A system for biomedical ontology selection

M Martínez-Romero, JM Vázquez-Naya… - Computer methods and …, 2014 - Elsevier
In biomedical informatics, ontologies are considered a key technology for annotating,
retrieving and sharing the huge volume of publicly available data. Due to the increasing …

NCBO Technology: Powering semantically aware applications

PL Whetzel, NCBO Team - Journal of biomedical semantics, 2013 - Springer
As new biomedical technologies are developed, the amount of publically available
biomedical data continues to increase. To help manage these vast and disparate data …

The national center for biomedical ontology

MA Musen, NF Noy, NH Shah… - Journal of the …, 2012 - academic.oup.com
Abstract The National Center for Biomedical Ontology is now in its seventh year. The goals
of this National Center for Biomedical Computing are to: create and maintain a repository of …

User centered and ontology based information retrieval system for life sciences

MF Sy, S Ranwez, J Montmain, A Regnault… - BMC …, 2012 - Springer
Background Because of the increasing number of electronic resources, designing efficient
tools to retrieve and exploit them is a major challenge. Some improvements have been …