Predicting mesh beyond medline

AK Kehoe, VI Torvik, MB Ross… - Proceedings of the 1st …, 2017 - dl.acm.org
Medical subject headings (MeSH) are a flexible and useful tool for describing biomedical
concepts. Here, we present MeSHier, a tool for assigning MeSH terms to biomedical …

Predicting medical subject headings based on abstract similarity and citations to MEDLINE records

AK Kehoe, VI Torvik - Proceedings of the 16th ACM/IEEE-CS on Joint …, 2016 - dl.acm.org
We describe a classifier-enhanced nearest neighbor approach to assigning Medical Subject
Headings (MeSH) to unlabeled documents using a combination of abstract similarities and …

Anticipating annotations and emerging trends in biomedical literature

F Mörchen, M Dejori, D Fradkin, J Etienne… - Proceedings of the 14th …, 2008 - dl.acm.org
The BioJournalMonitor is a decision support system for the analysis of trends and topics in
the biomedical literature. Its main goal is to identify potential diagnostic and therapeutic …

Meshable: searching PubMed abstracts by utilizing MeSH and MeSH-derived topical terms

S Kim, L Yeganova, WJ Wilbur - Bioinformatics, 2016 - academic.oup.com
Medical Subject Headings (MeSH®) is a controlled vocabulary for indexing and searching
biomedical literature. MeSH terms and subheadings are organized in a hierarchical …

[HTML][HTML] Two similarity metrics for medical subject headings (mesh):: An aid to biomedical text mining and author name disambiguation

NR Smalheiser, G Bonifield - Journal of biomedical discovery and …, 2016 - ncbi.nlm.nih.gov
In the present paper, we have created and characterized several similarity metrics for
relating any two Medical Subject Headings (MeSH terms) to each other. The article-based …

Leveraging output term co-occurrence frequencies and latent associations in predicting medical subject headings

R Kavuluru, Y Lu - Data & Knowledge Engineering, 2014 - Elsevier
Trained indexers at the National Library of Medicine (NLM) manually tag each biomedical
abstract with the most suitable terms from the Medical Subject Headings (MeSH) …

[HTML][HTML] PubMedMiner: mining and visualizing MeSH-based associations in PubMed

Y Zhang, IN Sarkar, ES Chen - AMIA Annual Symposium …, 2014 - ncbi.nlm.nih.gov
The exponential growth of biomedical literature provides the opportunity to develop
approaches for facilitating the identification of possible relationships between biomedical …

[PDF][PDF] Statistical modeling of medical indexing processes for biomedical knowledge information discovery from text

M Bundschus, M Dejori, S Yu, V Tresp… - Proceedings of the 8th …, 2008 - researchgate.net
The overwhelming amount of published literature in the biomedical domain and the growing
number of collaborations across scientific disciplines results in an increasing topical …

Unsupervised medical subject heading assignment using output label co-occurrence statistics and semantic predications

R Kavuluru, Z He - International Conference on Application of Natural …, 2013 - Springer
Abstract Librarians at the National Library of Medicine tag each biomedical abstract to be
indexed by their Pubmed information system with terms from the Medical Subject Headings …

Quantitative biomedical annotation using medical subject heading over-representation profiles (MeSHOPs)

WA Cheung, BFF Ouellette, WW Wasserman - BMC bioinformatics, 2012 - Springer
Abstract Background MEDLINE®/PubMed® indexes over 20 million biomedical articles,
providing curated annotation of its contents using a controlled vocabulary known as Medical …