[PDF][PDF] Lineage calling can identify antibiotic resistant clones within minutes

K Břinda, A Callendrello, L Cowley, T Charalampous… - …, 2018 - scholar.harvard.edu
Antibiotic-resistant infections pose multiple challenges to healthcare systems, contributing to
higher mortality, morbidity, and escalating cost. Clinicians must regularly make rapid …

Comprehensive antibiotic-linked mutation assessment by resistance mutation sequencing (RM-seq)

R Guérillot, L Li, S Baines, B Howden, MB Schultz… - Genome medicine, 2018 - Springer
Mutation acquisition is a major mechanism of bacterial antibiotic resistance that remains
insufficiently characterised. Here we present RM-seq, a new amplicon-based deep …

[HTML][HTML] Breaking the code of antibiotic resistance

SW Lo, N Kumar, NE Wheeler - Nature Reviews Microbiology, 2018 - nature.com
Breaking the code of antibiotic resistance | Nature Reviews Microbiology Skip to main content
Thank you for visiting nature.com. You are using a browser version with limited support for …

Tracking antibiotic resistance

SA Beatson, MJ Walker - Science, 2014 - science.org
According to the World Health Organization,“Antimicrobial resistance… threatens the
effective prevention and treatment of an ever-increasing range of infections caused by …

Single-cell pathogen diagnostics for combating antibiotic resistance

H Li, K Hsieh, PK Wong, KE Mach, JC Liao… - Nature Reviews …, 2023 - nature.com
Bacterial infections and antimicrobial resistance are a major cause for morbidity and
mortality worldwide. Antimicrobial resistance often arises from antimicrobial misuse, where …

One-day workflow scheme for bacterial pathogen detection and antimicrobial resistance testing from blood cultures

WLJ Hansen, J Beuving, A Verbon… - JoVE (Journal of Visualized …, 2012 - jove.com
Bloodstream infections are associated with high mortality rates because of the probable
manifestation of sepsis, severe sepsis and septic shock1. Therefore, rapid administration of …

Assess drug-resistance phenotypes, not just genotypes

LJV Piddock - Nature microbiology, 2016 - nature.com
Whole genome sequencing (WGS) is increasingly advocated as a diagnostic tool to identify
the cause (s) of infection and/or drug resistance1. With rapid advances in sequencing …

A genome-wide atlas of antibiotic susceptibility targets and pathways to tolerance

D Leshchiner, F Rosconi, B Sundaresh… - Nature …, 2022 - nature.com
Detailed knowledge on how bacteria evade antibiotics and eventually develop resistance
could open avenues for novel therapeutics and diagnostics. It is thereby key to develop a …

Identification of acquired antimicrobial resistance genes

E Zankari, H Hasman, S Cosentino… - Journal of …, 2012 - academic.oup.com
Objectives Identification of antimicrobial resistance genes is important for understanding the
underlying mechanisms and the epidemiology of antimicrobial resistance. As the costs of …

GWAMAR: Genome-wide assessment of mutations associated with drug resistance in bacteria

M Wozniak, J Tiuryn, L Wong - BMC genomics, 2014 - Springer
Background Development of drug resistance in bacteria causes antibiotic therapies to be
less effective and more costly. Moreover, our understanding of the process remains …