Practical guidelines for the use of gradient boosting for molecular property prediction

D Boldini, F Grisoni, D Kuhn, L Friedrich… - Journal of …, 2023 - Springer
Decision tree ensembles are among the most robust, high-performing and computationally
efficient machine learning approaches for quantitative structure–activity relationship (QSAR) …

Comprehensive ensemble in QSAR prediction for drug discovery

S Kwon, H Bae, J Jo, S Yoon - BMC bioinformatics, 2019 - Springer
Background Quantitative structure-activity relationship (QSAR) is a computational modeling
method for revealing relationships between structural properties of chemical compounds …

Ensemble machine learning approach for quantitative structure activity relationship based drug discovery: A Review

TR Noviandy, A Maulana, GM Idroes… - Infolitika Journal of …, 2023 - heca-analitika.com
This comprehensive review explores the pivotal role of ensemble machine learning
techniques in Quantitative Structure-Activity Relationship (QSAR) modeling for drug …

Inductive transfer learning for molecular activity prediction: Next-Gen QSAR Models with MolPMoFiT

X Li, D Fourches - Journal of Cheminformatics, 2020 - Springer
Deep neural networks can directly learn from chemical structures without extensive, user-
driven selection of descriptors in order to predict molecular properties/activities with high …

Extreme gradient boosting as a method for quantitative structure–activity relationships

RP Sheridan, WM Wang, A Liaw, J Ma… - Journal of chemical …, 2016 - ACS Publications
In the pharmaceutical industry it is common to generate many QSAR models from training
sets containing a large number of molecules and a large number of descriptors. The best …

General approach to estimate error bars for quantitative structure–activity relationship predictions of molecular activity

R Liu, KP Glover, MG Feasel… - Journal of Chemical …, 2018 - ACS Publications
Key requirements for quantitative structure–activity relationship (QSAR) models to gain
acceptance by regulatory authorities include a defined domain of applicability (DA) and …

Comprehensive strategies of machine-learning-based quantitative structure-activity relationship models

J Mao, J Akhtar, X Zhang, L Sun, S Guan, X Li, G Chen… - Iscience, 2021 - cell.com
Early quantitative structure-activity relationship (QSAR) technologies have unsatisfactory
versatility and accuracy in fields such as drug discovery because they are based on …

[HTML][HTML] Multi-task learning models for predicting active compounds

Z Zhao, J Qin, Z Gou, Y Zhang, Y Yang - Journal of Biomedical Informatics, 2020 - Elsevier
The computational drug discovery methods can find potential drug-target interactions more
efficiently and have been widely studied over past few decades. Such methods explore the …

Deep neural networks for QSAR

Y Xu - Artificial intelligence in drug design, 2022 - Springer
Quantitative structure–activity relationship (QSAR) models are routinely applied
computational tools in the drug discovery process. QSAR models are regression or …

Comparison and improvement of the predictability and interpretability with ensemble learning models in QSPR applications

CH Chen, K Tanaka, M Kotera, K Funatsu - Journal of cheminformatics, 2020 - Springer
Ensemble learning helps improve machine learning results by combining several models
and allows the production of better predictive performance compared to a single model. It …