Determining the validity of a QSAR model− a classification approach

R Guha, PC Jurs - Journal of chemical information and modeling, 2005 - ACS Publications
The determination of the validity of a QSAR model when applied to new compounds is an
important concern in the field of QSAR and QSPR modeling. Various scoring techniques can …

How important is to detect systematic error in predictions and understand statistical applicability domain of QSAR models?

K Roy, P Ambure, RB Aher - Chemometrics and Intelligent Laboratory …, 2017 - Elsevier
One of the important applications of quantitative structure-activity relationship (QSAR)
models is to fill data gaps by predicting a given response property or activity from known …

Study of the applicability domain of the QSAR classification models by means of the rivality and modelability indexes

I Luque Ruiz, MÁ Gómez-Nieto - Molecules, 2018 - mdpi.com
The reliability of a QSAR classification model depends on its capacity to achieve confident
predictions of new compounds not considered in the building of the model. The results of …

[PDF][PDF] External evaluation of QSAR models, in addition to cross-validation: verification of predictive capability on totally new chemicals

P Gramatica - Mol Inform, 2014 - academia.edu
Dear Editors, an interesting paper of Gütlein et al., recently published in your journal,[1] has
reopened the debate on the crucial topic of QSAR model validation, which, over the past …

A historical excursus on the statistical validation parameters for QSAR models: a clarification concerning metrics and terminology

P Gramatica, A Sangion - Journal of chemical information and …, 2016 - ACS Publications
In the last years, external validation of QSAR models was the subject of intensive debate in
the scientific literature. Different groups have proposed different metrics to find “the best” …

Real external predictivity of QSAR models: how to evaluate it? Comparison of different validation criteria and proposal of using the concordance correlation coefficient

N Chirico, P Gramatica - Journal of chemical information and …, 2011 - ACS Publications
The main utility of QSAR models is their ability to predict activities/properties for new
chemicals, and this external prediction ability is evaluated by means of various validation …

Three useful dimensions for domain applicability in QSAR models using random forest

RP Sheridan - Journal of chemical information and modeling, 2012 - ACS Publications
One popular metric for estimating the accuracy of prospective quantitative structure–activity
relationship (QSAR) predictions is based on the similarity of the compound being predicted …

Real external predictivity of QSAR models. Part 2. New intercomparable thresholds for different validation criteria and the need for scatter plot inspection

N Chirico, P Gramatica - Journal of chemical information and …, 2012 - ACS Publications
The evaluation of regression QSAR model performance, in fitting, robustness, and external
prediction, is of pivotal importance. Over the past decade, different external validation …

Similarity to molecules in the training set is a good discriminator for prediction accuracy in QSAR

RP Sheridan, BP Feuston, VN Maiorov… - Journal of chemical …, 2004 - ACS Publications
How well can a QSAR model predict the activity of a molecule not in the training set used to
create the model? A set of retrospective cross-validation experiments using 20 diverse in …

Beware of R2: Simple, Unambiguous Assessment of the Prediction Accuracy of QSAR and QSPR Models

DLJ Alexander, A Tropsha… - Journal of chemical …, 2015 - ACS Publications
The statistical metrics used to characterize the external predictivity of a model, ie, how well it
predicts the properties of an independent test set, have proliferated over the past decade …