Structural dynamics of the SARS-CoV-2 spike protein: A 2-year retrospective analysis of SARS-CoV-2 variants (from Alpha to Omicron) reveals an early divergence …

P Guérin, N Yahi, F Azzaz, H Chahinian, JM Sabatier… - Molecules, 2022 - mdpi.com
We analyzed the epitope evolution of the spike protein in 1,860,489 SARS-CoV-2 genomes.
The structural dynamics of these epitopes was determined by molecular modeling …

Structure and mutations of SARS-CoV-2 spike protein: a focused overview

R Mehra, KP Kepp - ACS Infectious Diseases, 2021 - ACS Publications
The spike protein (S-protein) of SARS-CoV-2, the protein that enables the virus to infect
human cells, is the basis for many vaccines and a hotspot of concerning virus evolution …

Structural impact of mutation D614G in SARS-CoV-2 spike protein: enhanced infectivity and therapeutic opportunity

A Fernández - ACS medicinal chemistry letters, 2020 - ACS Publications
With the COVID-19 pandemic, the evolutionary fate of SARS-CoV-2 becomes a matter of
utmost concern. Mutation D614G in the spike (S) protein has become dominant, and recent …

[HTML][HTML] Identification of conserved epitopes in SARS-CoV-2 spike and nucleocapsid protein

S Forcelloni, A Benedetti, M Dilucca… - Current Genomics, 2021 - ncbi.nlm.nih.gov
Background Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a novel
virus that first occurred in Wuhan in December 2019. The spike glycoproteins and …

[HTML][HTML] Structural and functional analysis of the D614G SARS-CoV-2 spike protein variant

L Yurkovetskiy, X Wang, KE Pascal, C Tomkins-Tinch… - Cell, 2020 - cell.com
Summary The SARS-CoV-2 spike (S) protein variant D614G supplanted the ancestral virus
worldwide, reaching near fixation in a matter of months. Here we show that D614G was …

Structural diversity of the SARS-CoV-2 Omicron spike

SMC Gobeil, R Henderson, V Stalls, K Janowska… - Molecular cell, 2022 - cell.com
Aided by extensive spike protein mutation, the SARS-CoV-2 Omicron variant overtook the
previously dominant Delta variant. Spike conformation plays an essential role in SARS-CoV …

Mutations and evolution of the SARS-CoV-2 spike protein

N Magazine, T Zhang, Y Wu, MC McGee, G Veggiani… - Viruses, 2022 - mdpi.com
The SARS-CoV-2 spike protein mediates target recognition, cellular entry, and ultimately the
viral infection that leads to various levels of COVID-19 severities. Positive evolutionary …

SARS-CoV-2 spike protein: flexibility as a new target for fighting infection

CL Pierri - Signal Transduction and Targeted Therapy, 2020 - nature.com
The spike protein of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is
crucial for the infection because it mediates the virus entry into human host-cells, through …

Structural dynamics in the evolution of SARS-CoV-2 spike glycoprotein

V Calvaresi, AG Wrobel, J Toporowska… - Nature …, 2023 - nature.com
SARS-CoV-2 spike glycoprotein mediates receptor binding and subsequent membrane
fusion. It exists in a range of conformations, including a closed state unable to bind the ACE2 …

A neutralizing human antibody binds to the N-terminal domain of the Spike protein of SARS-CoV-2

X Chi, R Yan, J Zhang, G Zhang, Y Zhang, M Hao… - Science, 2020 - science.org
Developing therapeutics against severe acute respiratory syndrome coronavirus 2 (SARS-
CoV-2) could be guided by the distribution of epitopes, not only on the receptor binding …