Attention-based knowledge graph representation learning for predicting drug-drug interactions

X Su, L Hu, Z You, P Hu, B Zhao - Briefings in bioinformatics, 2022 - academic.oup.com
Drug–drug interactions (DDIs) are known as the main cause of life-threatening adverse
events, and their identification is a key task in drug development. Existing computational …

Drug–target interaction prediction using knowledge graph embedding

N Li, Z Yang, J Wang, H Lin - iScience, 2024 - cell.com
The prediction of drug-target interactions (DTIs) is a critical phase in the sustainable drug
development process, especially when the research focus is to capitalize on the …

EKGDR: An End-to-End Knowledge Graph-Based Method for Computational Drug Repurposing

J Tayebi, B BabaAli - Journal of Chemical Information and …, 2024 - ACS Publications
The lengthy and expensive process of developing new drugs from scratch, coupled with a
high failure rate, has prompted the emergence of drug repurposing/repositioning as a more …

Toward better drug discovery with knowledge graph

X Zeng, X Tu, Y Liu, X Fu, Y Su - Current opinion in structural biology, 2022 - Elsevier
Drug discovery is the process of new drug identification. This process is driven by the
increasing data from existing chemical libraries and data banks. The knowledge graph is …

The OREGANO knowledge graph for computational drug repurposing

M Boudin, G Diallo, M Drancé, F Mougin - Scientific data, 2023 - nature.com
Drug repositioning is a faster and more affordable solution than traditional drug discovery
approaches. From this perspective, computational drug repositioning using knowledge …

Drug target discovery using knowledge graph embeddings

SK Mohamed, A Nounu, V Nováček - Proceedings of the 34th ACM …, 2019 - dl.acm.org
The field of drug discovery has entered a plateau stage lately. It is increasingly more
expensive and time-demanding to introduce new drugs into the market. One of the main …

Analysis of Drug repurposing Knowledge graphs for Covid-19

AK Gogineni - arXiv preprint arXiv:2212.03911, 2022 - arxiv.org
Knowledge graph (KG) is used to represent data in terms of entities and structural relations
between the entities. This representation can be used to solve complex problems such as …

KG-DTI: a knowledge graph based deep learning method for drug-target interaction predictions and Alzheimer's disease drug repositions

S Wang, Z Du, M Ding, A Rodriguez-Paton, T Song - Applied Intelligence, 2022 - Springer
Drug repositioning, which recommends approved drugs to potential targets by predicting
drug-target interactions (DTIs), can save the cost and shorten the period of drug …

KGAT: Predicting Drug-Target Interaction Based on Knowledge Graph Attention Network

Z Wu, X Zhang, X Lin - International Conference on Intelligent Computing, 2022 - Springer
Prediction of Drug-target interaction (DTI) is an important topic in bioinformatics which plays
an important role in the process of drug discovery. Although many machine learning …

Drug-CoV: a drug-origin knowledge graph discovering drug repurposing targeting COVID-19

S Li, KW Wong, D Zhu, CC Fung - Knowledge and Information Systems, 2023 - Springer
Drug repurposing is a technique for probing new usages of existing medicines, but its
traditional methods, such as computational approaches, can be time-consuming and …