NO Friedrich, F Flachsenberg, A Meyder… - Journal of chemical …, 2019 - ACS Publications
Computer-aided drug design methods such as docking, pharmacophore searching, 3D database searching, and the creation of 3D-QSAR models need conformational ensembles …
S Riniker, GA Landrum - Journal of chemical information and …, 2015 - ACS Publications
Small organic molecules are often flexible, ie, they can adopt a variety of low-energy conformations in solution that exist in equilibrium with each other. Two main search …
B Musafia, H Senderowitz - Expert opinion on drug discovery, 2010 - Taylor & Francis
Importance of the field: In silico or virtual screening has become a common practice in contemporary computer-aided drug discovery efforts and currently constitutes a reasonably …
T Seidel, C Permann, O Wieder… - Journal of Chemical …, 2023 - ACS Publications
Knowledge of the putative bound-state conformation of a molecule is an essential prerequisite for the successful application of many computer-aided drug design methods …
PCD Hawkins - Journal of chemical information and modeling, 2017 - ACS Publications
The generation of conformations for small molecules is a problem of continuing interest in cheminformatics and computational drug discovery. This review will present an overview of …
Conformer generation has important implications in cheminformatics, particularly in computational drug discovery where the quality of conformer generation software may affect …
DK Agrafiotis, AC Gibbs, F Zhu, S Izrailev… - Journal of chemical …, 2007 - ACS Publications
The necessity to generate conformations that sample the entire conformational space accessible to a given molecule is ubiquitous in the field of computer-aided drug design …
A Griewel, O Kayser, J Schlosser… - Journal of chemical …, 2009 - ACS Publications
We introduce the TrixX Conformer Generator (TCG), a novel tool for generating conformational ensembles. The tool addresses especially the requirements of large-scale …
C Schärfer, T Schulz‐Gasch, J Hert… - …, 2013 - Wiley Online Library
The generation of sets of low‐energy conformations for a given molecule is a central task in drug design. Herein we present a new conformation generator called CONFECT that builds …