Inferring nonlinear neuronal computation based on physiologically plausible inputs

JM McFarland, Y Cui, DA Butts - PLoS computational biology, 2013 - journals.plos.org
The computation represented by a sensory neuron's response to stimuli is constructed from
an array of physiological processes both belonging to that neuron and inherited from its …

Active data collection for efficient estimation and comparison of nonlinear neural models

C DiMattina, K Zhang - Neural computation, 2011 - direct.mit.edu
The stimulus-response relationship of many sensory neurons is nonlinear, but fully
quantifying this relationship by a complex nonlinear model may require too much data to be …

Adaptive stimulus optimization for sensory systems neuroscience

C DiMattina, K Zhang - Frontiers in neural circuits, 2013 - frontiersin.org
In this paper, we review several lines of recent work aimed at developing practical methods
for adaptive on-line stimulus generation for sensory neurophysiology. We consider various …

Fitting neuron models to spike trains

C Rossant, DFM Goodman, B Fontaine… - Frontiers in …, 2011 - frontiersin.org
Computational modeling is increasingly used to understand the function of neural circuits in
systems neuroscience. These studies require models of individual neurons with realistic …

Inferring input nonlinearities in neural encoding models

MB Ahrens, L Paninski, M Sahani - Network: Computation in Neural …, 2008 - Taylor & Francis
We describe a class of models that predict how the instantaneous firing rate of a neuron
depends on a dynamic stimulus. The models utilize a learnt pointwise nonlinear transform of …

Ensembles of spiking neurons with noise support optimal probabilistic inference in a dynamically changing environment

R Legenstein, W Maass - PLoS computational biology, 2014 - journals.plos.org
It has recently been shown that networks of spiking neurons with noise can emulate simple
forms of probabilistic inference through “neural sampling”, ie, by treating spikes as samples …

Inferring hidden structure in multilayered neural circuits

N Maheswaranathan, DB Kastner… - PLoS computational …, 2018 - journals.plos.org
A central challenge in sensory neuroscience involves understanding how neural circuits
shape computations across cascaded cell layers. Here we attempt to reconstruct the …

The centrality of population-level factors to network computation is demonstrated by a versatile approach for training spiking networks

B DePasquale, D Sussillo, LF Abbott, MM Churchland - Neuron, 2023 - cell.com
Neural activity is often described in terms of population-level factors extracted from the
responses of many neurons. Factors provide a lower-dimensional description with the aim of …

A canonical neural circuit for cortical nonlinear operations

M Kouh, T Poggio - Neural computation, 2008 - direct.mit.edu
A few distinct cortical operations have been postulated over the past few years, suggested
by experimental data on nonlinear neural response across different areas in the cortex …

Learning probabilistic neural representations with randomly connected circuits

O Maoz, G Tkačik, MS Esteki, R Kiani… - Proceedings of the …, 2020 - National Acad Sciences
The brain represents and reasons probabilistically about complex stimuli and motor actions
using a noisy, spike-based neural code. A key building block for such neural computations …