Unifying O (3) equivariant neural networks design with tensor-network formalism

Z Li, Z Pengmei, H Zheng, E Thiede… - Machine Learning …, 2024 - iopscience.iop.org
Many learning tasks, including learning potential energy surfaces from ab initio calculations,
involve global spatial symmetries and permutational symmetry between atoms or general …

A systematic survey of chemical pre-trained models

J Xia, Y Zhu, Y Du, SZ Li - arXiv preprint arXiv:2210.16484, 2022 - arxiv.org
Deep learning has achieved remarkable success in learning representations for molecules,
which is crucial for various biochemical applications, ranging from property prediction to …

Coarse-graining with equivariant neural networks: A path toward accurate and data-efficient models

TD Loose, PG Sahrmann, TS Qu… - The Journal of Physical …, 2023 - ACS Publications
Machine learning has recently entered into the mainstream of coarse-grained (CG)
molecular modeling and simulation. While a variety of methods for incorporating deep …

PiNN: A python library for building atomic neural networks of molecules and materials

Y Shao, M Hellstrom, PD Mitev, L Knijff… - Journal of chemical …, 2020 - ACS Publications
Atomic neural networks (ANNs) constitute a class of machine learning methods for
predicting potential energy surfaces and physicochemical properties of molecules and …

Autonomous discovery of unknown reaction pathways from data by chemical reaction neural network

W Ji, S Deng - The Journal of Physical Chemistry A, 2021 - ACS Publications
Chemical reactions occur in energy, environmental, biological, and many other natural
systems, and the inference of the reaction networks is essential to understand and design …

Combining machine learning and computational chemistry for predictive insights into chemical systems

JA Keith, V Vassilev-Galindo, B Cheng… - Chemical …, 2021 - ACS Publications
Machine learning models are poised to make a transformative impact on chemical sciences
by dramatically accelerating computational algorithms and amplifying insights available from …

The Potential of Neural Network Potentials

TT Duignan - ACS Physical Chemistry Au, 2024 - ACS Publications
In the next half-century, physical chemistry will likely undergo a profound transformation,
driven predominantly by the combination of recent advances in quantum chemistry and …

Structure-preserving joint non-negative tensor factorization to identify reaction pathways using Bayesian networks

A Puliyanda, K Sivaramakrishnan, Z Li… - Journal of Chemical …, 2021 - ACS Publications
Extracting meaningful information from spectroscopic data is key to species identification as
a first step to monitoring chemical reactions in unknown complex mixtures. Spectroscopic …

Machine learning of solvent effects on molecular spectra and reactions

M Gastegger, KT Schütt, KR Müller - Chemical science, 2021 - pubs.rsc.org
Fast and accurate simulation of complex chemical systems in environments such as
solutions is a long standing challenge in theoretical chemistry. In recent years, machine …

Design and simulation of a multilayer chemical neural network that learns via backpropagation

MR Lakin - Artificial Life, 2023 - direct.mit.edu
The design and implementation of adaptive chemical reaction networks, capable of
adjusting their behavior over time in response to experience, is a key goal for the fields of …