Deductive machine learning models for product identification

T Jin, Q Zhao, AB Schofield, BM Savoie - Chemical Science, 2024 - pubs.rsc.org
Deductive solution strategies are required in prediction scenarios that are under determined,
when contradictory information is available, or more generally wherever one-to-many non …

NeuralNEB—neural networks can find reaction paths fast

M Schreiner, A Bhowmik, T Vegge… - Machine Learning …, 2022 - iopscience.iop.org
Quantum mechanical methods like density functional theory (DFT) are used with great
success alongside efficient search algorithms for studying kinetics of reactive systems …

Generating transition states of isomerization reactions with deep learning

L Pattanaik, JB Ingraham, CA Grambow… - Physical Chemistry …, 2020 - pubs.rsc.org
Lack of quality data and difficulty generating these data hinder quantitative understanding of
reaction kinetics. Specifically, conventional methods to generate transition state structures …

[HTML][HTML] Quantum chemistry-augmented neural networks for reactivity prediction: Performance, generalizability, and explainability

T Stuyver, CW Coley - The Journal of Chemical Physics, 2022 - pubs.aip.org
There is a perceived dichotomy between structure-based and descriptor-based molecular
representations used for predictive chemistry tasks. Here, we study the performance …

Multifidelity neural network formulations for prediction of reactive molecular potential energy surfaces

Y Yang, MS Eldred, J Zádor… - Journal of Chemical …, 2023 - ACS Publications
This paper focuses on the development of multifidelity modeling approaches using neural
network surrogates, where training data arising from multiple model forms and resolutions …

Uncertainty quantified discovery of chemical reaction systems via Bayesian scientific machine learning

E Nieves, R Dandekar, C Rackauckas - Frontiers in Systems Biology, 2024 - frontiersin.org
The recently proposed Chemical Reaction Neural Network (CRNN) discovers chemical
reaction pathways from time resolved species concentration data in a deterministic manner …

Automated deep abstractions for stochastic chemical reaction networks

T Petrov, D Repin - arXiv preprint arXiv:2002.01889, 2020 - arxiv.org
Predicting stochastic cellular dynamics as emerging from the mechanistic models of
molecular interactions is a long-standing challenge in systems biology: low-level chemical …

ArcaNN: automated enhanced sampling generation of training sets for chemically reactive machine learning interatomic potentials

R David, M de la Puente, A Gomez, O Anton… - arXiv preprint arXiv …, 2024 - arxiv.org
The emergence of artificial intelligence has profoundly impacted computational chemistry,
particularly through machine-learned potentials (MLPs), which offer a balance of accuracy …

[HTML][HTML] Balancing Wigner sampling and geometry interpolation for deep neural networks learning photochemical reactions

L Wang, Z Li, J Li - Artificial Intelligence Chemistry, 2023 - Elsevier
Abstract Machine learning photodynamics simulations are revolutionary tools to resolve
elusive photochemical reaction mechanisms with time-dependent high-fidelity structure …

Application of Deep Learning in Chemical Processes: Explainability, Monitoring and Observability

P Agarwal - 2022 - uwspace.uwaterloo.ca
The last decade has seen remarkable advances in speech, image, and language
recognition tools that have been made available to the public through computer and mobile …