Genetic architecture of regulatory variation in Arabidopsis thaliana

X Zhang, AJ Cal, JO Borevitz - Genome research, 2011 - genome.cshlp.org
Studying the genetic regulation of expression variation is a key method to dissect complex
phenotypic traits. To examine the genetic architecture of regulatory variation in Arabidopsis …

Plant biology in 2010

C Somerville, J Dangl - Science, 2000 - science.org
The imminent completion of the Arabidopsis genome sequence represents the culmination
of a 10-year effort by the plant biology community. By the time the community was ready to …

Global urban environmental change drives adaptation in white clover

JS Santangelo, RW Ness, B Cohan, CR Fitzpatrick… - Science, 2022 - science.org
Urbanization transforms environments in ways that alter biological evolution. We examined
whether urban environmental change drives parallel evolution by sampling 110,019 white …

Epistatic QTLs for yield heterosis in tomato

S Torgeman, D Zamir - … of the National Academy of Sciences, 2023 - National Acad Sciences
Controlled population development and genome-wide association studies have proven
powerful in uncovering genes and alleles underlying complex traits. An underexplored …

Comparative network analysis reveals that tissue specificity and gene function are important factors influencing the mode of expression evolution in Arabidopsis and …

S Movahedi, Y Van de Peer, K Vandepoele - Plant physiology, 2011 - academic.oup.com
Microarray experiments have yielded massive amounts of expression information measured
under various conditions for the model species Arabidopsis (Arabidopsis thaliana) and rice …

Gene co-expression network connectivity is an important determinant of selective constraint

N Mähler, J Wang, BK Terebieniec, PK Ingvarsson… - PLoS …, 2017 - journals.plos.org
While several studies have investigated general properties of the genetic architecture of
natural variation in gene expression, few of these have considered natural, outbreeding …

Major impacts of widespread structural variation on gene expression and crop improvement in tomato

M Alonge, X Wang, M Benoit, S Soyk, L Pereira… - Cell, 2020 - cell.com
Structural variants (SVs) underlie important crop improvement and domestication traits.
However, resolving the extent, diversity, and quantitative impact of SVs has been …

Expression level polymorphisms: heritable traits shaping natural variation

C Delker, M Quint - Trends in plant science, 2011 - cell.com
Natural accessions of many species harbor a wealth of genetic variation visible in a large
array of phenotypes. Although expression level polymorphisms (ELPs) in several genes …

Homo experimentalis Evolves

JA List - Science, 2008 - science.org
13. JDG Jones, JL Dangl, Nature 444, 323 (2006). 14. See news. bbc. co.
uk/2/hi/science/nature/6197768. stm. 15. G. Diretto et al., BMC Plant Biol. 7, 11 (2007). 16. G …

The genetic landscape of a cell

M Costanzo, A Baryshnikova, J Bellay, Y Kim… - science, 2010 - science.org
A genome-scale genetic interaction map was constructed by examining 5.4 million gene-
gene pairs for synthetic genetic interactions, generating quantitative genetic interaction …