[HTML][HTML] Ontology-based collection, representation and analysis of drug-associated neuropathy adverse events

A Guo, R Racz, J Hur, Y Lin, Z Xiang, L Zhao… - Journal of biomedical …, 2016 - Springer
Background Neuropathy often occurs following drug treatment such as chemotherapy.
Severe instances of neuropathy can result in cessation of life-saving chemotherapy …

[HTML][HTML] ODAE: Ontology-based systematic representation and analysis of drug adverse events and its usage in study of adverse events given different patient age …

H Yu, S Nysak, N Garg, E Ong, X Ye, X Zhang, Y He - BMC bioinformatics, 2019 - Springer
Abstract Background Drug adverse events (AEs), or called adverse drug events (ADEs), are
ranked one of the leading causes of mortality. The Ontology of Adverse Events (OAE) has …

[HTML][HTML] Ontology-based literature mining and class effect analysis of adverse drug reactions associated with neuropathy-inducing drugs

J Hur, A Özgür, Y He - Journal of biomedical semantics, 2018 - Springer
Abstract Background Adverse drug reactions (ADRs), also called as drug adverse events
(AEs), are reported in the FDA drug labels; however, it is a big challenge to properly retrieve …

[PDF][PDF] An Ontology for Drug-drug Interactions.

M Herrero-Zazo, J Hastings, I Segura-Bedmar… - SWAT4LS, 2013 - Citeseer
Drug-drug interactions form a significant risk group for adverse effects associated with
pharmaceutical treatment. These interactions are often reported in the literature, however …

Needs for an expanded ontology‐based classification of adverse drug reactions and related mechanisms

PE Zhichkin, BD Athey, MI Avigan… - Clinical …, 2012 - Wiley Online Library
The growing significance of bioinformatics and systems biology in drug safety research
requires a system of adverse‐event classification that goes beyond a simple vocabulary …

[HTML][HTML] Toward a comprehensive drug ontology: extraction of drug-indication relations from diverse information sources

ME Sharp - Journal of biomedical semantics, 2017 - Springer
Background Drug ontologies could help pharmaceutical researchers overcome information
overload and speed the pace of drug discovery, thus benefiting the industry and patients …

Linking MedDRA®-Coded Clinical Phenotypes to Biological Mechanisms by the Ontology of Adverse Events: A Pilot Study on Tyrosine Kinase Inhibitors

S Sarntivijai, S Zhang, DG Jagannathan, S Zaman… - Drug safety, 2016 - Springer
Introduction A translational bioinformatics challenge exists in connecting population and
individual clinical phenotypes in various formats to biological mechanisms. The Medical …

Analysis of adverse drug reactions using drug and drug target interactions and graph-based methods

SF Lin, KT Xiao, YT Huang, CC Chiu… - Artificial intelligence in …, 2010 - Elsevier
OBJECTIVE: The purpose of this study was to integrate knowledge about drugs, drug
targets, and topological methods. The goals were to build a system facilitating the study of …

[HTML][HTML] Ontology-based vaccine and drug adverse event representation and theory-guided systematic causal network analysis toward integrative pharmacovigilance …

Y He - Current pharmacology reports, 2016 - Springer
Compared with controlled terminologies (eg, MedDRA, CTCAE, and WHO-ART), the
community-based Ontology of Adverse Events (OAEs) has many advantages in AE …

[HTML][HTML] Standardizing adverse drug event reporting data

L Wang, G Jiang, D Li, H Liu - Journal of biomedical semantics, 2014 - Springer
Abstract Background The Adverse Event Reporting System (AERS) is an FDA database
providing rich information on voluntary reports of adverse drug events (ADEs). Normalizing …