Realtime analysis and visualization of MinION sequencing data with npReader
Abstract Motivation: The recently released Oxford Nanopore MinION sequencing platform
presents many innovative features opening up potential for a range of applications not …
presents many innovative features opening up potential for a range of applications not …
poRe: an R package for the visualization and analysis of nanopore sequencing data
Abstract Motivation: The Oxford Nanopore MinION device represents a unique sequencing
technology. As a mobile sequencing device powered by the USB port of a laptop, the …
technology. As a mobile sequencing device powered by the USB port of a laptop, the …
Poretools: a toolkit for analyzing nanopore sequence data
NJ Loman, AR Quinlan - Bioinformatics, 2014 - academic.oup.com
Motivation: Nanopore sequencing may be the next disruptive technology in genomics, owing
to its ability to detect single DNA molecules without prior amplification, lack of reliance on …
to its ability to detect single DNA molecules without prior amplification, lack of reliance on …
MinIONQC: fast and simple quality control for MinION sequencing data
MinIONQC provides rapid diagnostic plots and quality control data from one or more
flowcells of sequencing data from Oxford Nanopore Technologies' MinION instrument. It can …
flowcells of sequencing data from Oxford Nanopore Technologies' MinION instrument. It can …
[HTML][HTML] NanoR: A user-friendly R package to analyze and compare nanopore sequencing data
D Bolognini, N Bartalucci, A Mingrino, AM Vannucchi… - PloS one, 2019 - journals.plos.org
MinION and GridION X5 from Oxford Nanopore Technologies are devices for real-time DNA
and RNA sequencing. On the one hand, MinION is the only real-time, low cost and portable …
and RNA sequencing. On the one hand, MinION is the only real-time, low cost and portable …
NanoPack: visualizing and processing long-read sequencing data
W De Coster, S D'hert, DT Schultz, M Cruts… - …, 2018 - academic.oup.com
Here we describe NanoPack, a set of tools developed for visualization and processing of
long-read sequencing data from Oxford Nanopore Technologies and Pacific Biosciences …
long-read sequencing data from Oxford Nanopore Technologies and Pacific Biosciences …
minoTour, real-time monitoring and analysis for nanopore sequencers
Abstract Summary minoTour offers a Laboratory Informations Management System (LIMS)
system for Oxford Nanopore Technology sequencers, with real-time metrics and analysis …
system for Oxford Nanopore Technology sequencers, with real-time metrics and analysis …
NanoPipe—a web server for nanopore MinION sequencing data analysis
V Shabardina, T Kischka, F Manske… - …, 2019 - academic.oup.com
Background The fast-moving progress of the third-generation long-read sequencing
technologies will soon bring the biological and medical sciences to a new era of research …
technologies will soon bring the biological and medical sciences to a new era of research …
On-site MinION sequencing
LR Runtuwene, JSB Tuda, AE Mongan… - Single molecule and …, 2019 - Springer
DNA sequencing has reached an unprecedented level with the advent of Oxford Nanopore
Technologies' MinION. The low equipment investment, ease of library preparation, small …
Technologies' MinION. The low equipment investment, ease of library preparation, small …
Nanocall: an open source basecaller for Oxford Nanopore sequencing data
Abstract Motivation The highly portable Oxford Nanopore MinION sequencer has enabled
new applications of genome sequencing directly in the field. However, the MinION currently …
new applications of genome sequencing directly in the field. However, the MinION currently …