Synthetic control systems for high performance gene expression in mammalian cells

G Lillacci, Y Benenson, M Khammash - Nucleic acids research, 2018 - academic.oup.com
Tunable induction of gene expression is an essential tool in biology and biotechnology. In
spite of that, current induction systems often exhibit unpredictable behavior and performance …

In vitro implementation of robust gene regulation in a synthetic biomolecular integral controller

DK Agrawal, R Marshall, V Noireaux… - Nature …, 2019 - nature.com
Feedback mechanisms play a critical role in the maintenance of cell homeostasis in the
presence of disturbances and uncertainties. Motivated by the need to tune the dynamics and …

Automatic control of gene expression in mammalian cells

C Fracassi, L Postiglione, G Fiore… - ACS synthetic …, 2016 - ACS Publications
Automatic control of gene expression in living cells is paramount importance to characterize
both endogenous gene regulatory networks and synthetic circuits. In addition, such a …

A genetic mammalian proportional–integral feedback control circuit for robust and precise gene regulation

T Frei, CH Chang, M Filo… - Proceedings of the …, 2022 - National Acad Sciences
The processes that keep a cell alive are constantly challenged by unpredictable changes in
its environment. Cells manage to counteract these changes by employing sophisticated …

Advances and current limitations in transcript-level control of gene expression

JM Leavitt, HS Alper - Current opinion in biotechnology, 2015 - Elsevier
Highlights•Transcriptional engineering provides tight control of gene expression in
eukaryotes.•Synthetic promoters provide iterative improvements in strength.•Orthogonal …

An endoribonuclease-based feedforward controller for decoupling resource-limited genetic modules in mammalian cells

RD Jones, Y Qian, V Siciliano, B DiAndreth… - Nature …, 2020 - nature.com
Synthetic biology has the potential to bring forth advanced genetic devices for applications
in healthcare and biotechnology. However, accurately predicting the behavior of engineered …

Artificial regulatory networks and cascades for discrete multilevel transgene control in mammalian cells

BP Kramer, W Weber… - Biotechnology and …, 2003 - Wiley Online Library
Prototype drug‐adjustable heterologous transcription control systems designed for gene
therapy applications typically show sigmoid dose–response characteristics and enable fine …

A modular positive feedback-based gene amplifier

GJ Nistala, K Wu, CV Rao, KD Bhalerao - Journal of biological engineering, 2010 - Springer
Background Positive feedback is a common mechanism used in the regulation of many
gene circuits as it can amplify the response to inducers and also generate binary outputs …

Negative autoregulation linearizes the dose–response and suppresses the heterogeneity of gene expression

D Nevozhay, RM Adams, KF Murphy… - Proceedings of the …, 2009 - National Acad Sciences
Although several recent studies have focused on gene autoregulation, the effects of
negative feedback (NF) on gene expression are not fully understood. Our purpose here was …

Small molecule-inducible gene regulatory systems in mammalian cells: progress and design principles

M Siddiqui, C Tous, WW Wong - Current opinion in biotechnology, 2022 - Elsevier
Highlights•Inducible gene regulation has been a critical tool in interrogating biological
systems.•Small-molecule induction enables regulation at the DNA, RNA, and protein …