Chromosome-level assembly and gene annotation of Decapterus maruadsi genome using Nanopore and Hi-C technologies

L Chen, Z Zhou, Z Zhou, J Yang, Y Deng, Y Bai, F Pu… - Scientific Data, 2024 - nature.com
Decapterus maruadsi is one of the representative offshore fish in the Western Pacific. Since
the last century, it has become a commercially valuable marine fishery species in the …

A chromosome-level genome assembly of the redfin culter (Chanodichthys erythropterus)

S Zhao, X Yang, B Pang, L Zhang, Q Wang, S He… - Scientific Data, 2022 - nature.com
Chanodichthys erythropterus is a fierce carnivorous fish widely found in East Asian waters. It
is not only a popular food fish in China, it is also a representative victim of overfishing …

Chromosome‐level genome assembly of the greenfin horse‐faced filefish (Thamnaconus septentrionalis) using Oxford Nanopore PromethION sequencing and Hi‐C …

L Bian, F Li, J Ge, P Wang, Q Chang… - Molecular Ecology …, 2020 - Wiley Online Library
The greenfin horse‐faced filefish, Thamnaconus septentrionalis, is a valuable commercial
fish species that is widely distributed in the Indo‐West Pacific Ocean. This fish has …

Chromosome‐level genome assembly of a cyprinid fish Onychostoma macrolepis by integration of nanopore sequencing, Bionano and Hi‐C technology

L Sun, T Gao, F Wang, Z Qin, L Yan… - Molecular ecology …, 2020 - Wiley Online Library
Onychostoma macrolepis is an emerging commercial cyprinid fish species. It is a model
system for studies of sexual dimorphism and genome evolution. Here, we report the …

Genome sequencing and assembly strategies and a comparative analysis of the genomic characteristics in penaeid shrimp species

J Yuan, X Zhang, F Li, J Xiang - Frontiers in genetics, 2021 - frontiersin.org
Penaeid shrimp (family Penaeidae) represents one of the most economically and
ecologically important groups of crustaceans. However, their genome sequencing and …

A chromosome‐level assembly of the black tiger shrimp (Penaeus monodon) genome facilitates the identification of growth‐associated genes

T Uengwetwanit, W Pootakham… - Molecular ecology …, 2021 - Wiley Online Library
To salvage marine ecosystems from fishery overexploitation, sustainable and efficient
aquaculture must be emphasized. The knowledge obtained from available genome …

Chromosomal-level assembly of yellow catfish genome using third-generation DNA sequencing and Hi-C analysis

G Gong, C Dan, S Xiao, W Guo, P Huang, Y Xiong… - …, 2018 - academic.oup.com
Abstract Background The yellow catfish, Pelteobagrus fulvidraco, belonging to the
Siluriformes order, is an economically important freshwater aquaculture fish species in Asia …

Chromosomal-level assembly of the blood clam, Scapharca (Anadara) broughtonii, using long sequence reads and Hi-C

CM Bai, LS Xin, U Rosani, B Wu, QC Wang… - …, 2019 - academic.oup.com
Abstract Background The blood clam, Scapharca (Anadara) broughtonii, is an economically
and ecologically important marine bivalve of the family Arcidae. Efforts to study their …

Genome survey sequencing of red swamp crayfish Procambarus clarkii

L Shi, S Yi, Y Li - Molecular biology reports, 2018 - Springer
Red swamp crayfish, Procambarus clarkii, presently is an important aquatic commercial
species in China. The crayfish is a hot area of research focus, and its genetic improvement is …

A Superior Contiguous Whole Genome Assembly for Shrimp (Penaeus indicus)

VK Katneni, MS Shekhar, AK Jangam… - Frontiers in Marine …, 2022 - frontiersin.org
Penaeid shrimp fishery and culture is a commercial enterprise contributing to employment,
nutritional security and foreign exchange of developing countries. The genetic improvement …