Geographical distance, host evolutionary history and diet drive gut microbiome diversity of fish across the Yellow River

B Pan, X Han, K Yu, H Sun, R Mu, CA Lian - Molecular Ecology, 2023 - Wiley Online Library
Fish represent a large part of the taxonomic diversity of vertebrates and are of high
commercial value. However, the factors influencing the gut microbiota composition of …

Environmental filtering decreases with fish development for the assembly of gut microbiota

Q Yan, J Li, Y Yu, J Wang, Z He… - Environmental …, 2016 - Wiley Online Library
Gut microbiota typically occupy habitats with definable limits/borders that are comparable to
oceanic islands. The gut therefore can be regarded as an 'island'for the assembly of …

Genetic difference but functional similarity among fish gut bacterial communities through molecular and biochemical fingerprints

MA Mouchet, C Bouvier, T Bouvier… - FEMS microbiology …, 2012 - academic.oup.com
Considering the major involvement of gut microflora in the digestive function of various
macro-organisms, bacterial communities inhabiting fish guts may be the main actors of …

Diversity of gut microbiomes in marine fishes is shaped by host‐related factors

Q Huang, RC Sham, Y Deng, Y Mao, C Wang… - Molecular …, 2020 - Wiley Online Library
Microorganisms in the gastrointestinal tract of animals play vital roles in food digestion,
homeostasis and immune response regulation. Globally, there are 33,700 fish species …

Gut Microbiome Analyses of Wild Migratory Freshwater Fish (Megalobrama terminalis) Through Geographic Isolation

Y Liu, Y Li, J Li, Q Zhou, X Li - Frontiers in Microbiology, 2022 - frontiersin.org
Gut microbiome is considered as a critical role in host digestion and metabolic homeostasis.
Nevertheless, the lack of knowledge concerning how the host-associated gut microbiome …

Quantifying the colonization of environmental microbes in the fish gut: a case study of wild fish populations in the Yangtze River

H Yang, J Wu, H Du, H Zhang, J Li, Q Wei - Frontiers in Microbiology, 2022 - frontiersin.org
In aquatic animals, gut microbial communities shift with host development and living
environments. Understanding the mechanism by which the environment impacts the gut …

Host habitat is the major determinant of the gut microbiome of fish

PS Kim, NR Shin, JB Lee, MS Kim, TW Whon… - Microbiome, 2021 - Springer
Background Our understanding of the gut microbiota of animals is largely based on studies
of mammals. To better understand the evolutionary basis of symbiotic relationships between …

Host species and habitat shape fish-associated bacterial communities: phylosymbiosis between fish and their microbiome

J Sadeghi, SR Chaganti, TB Johnson, DD Heath - Microbiome, 2023 - Springer
Background While many studies have reported that the structure of the gut and skin
microbiota is driven by both species-specific and habitat-specific factors, the relative …

The intestinal digesta microbiota of tropical marine fish is largely uncultured and distinct from surrounding water microbiota

M Soh, YC Tay, CS Lee, A Low, L Orban… - npj Biofilms and …, 2024 - nature.com
Studying the gut microbes of marine fishes is an important part of conservation as many fish
species are increasingly threatened by extinction. The gut microbiota of only a small fraction …

Gut microbiomes of cyprinid fish exhibit host-species symbiosis along gut trait and diet

Y Liu, X Li, Y Li, J Li, S Zhu - Frontiers in Microbiology, 2022 - frontiersin.org
Teleost omnivorous fish that coexist partially sharing resources are likely to modify their gut
traits and microbiome as a feedback mechanism between ecological processes and …