Machine learning for high-throughput stress phenotyping in plants

A Singh, B Ganapathysubramanian, AK Singh… - Trends in plant …, 2016 - cell.com
Advances in automated and high-throughput imaging technologies have resulted in a
deluge of high-resolution images and sensor data of plants. However, extracting patterns …

Challenges and opportunities in machine-augmented plant stress phenotyping

A Singh, S Jones, B Ganapathysubramanian… - Trends in Plant …, 2021 - cell.com
Plant stress phenotyping is essential to select stress-resistant varieties and develop better
stress-management strategies. Standardization of visual assessments and deployment of …

Deep learning for plant stress phenotyping: trends and future perspectives

AK Singh, B Ganapathysubramanian, S Sarkar… - Trends in plant …, 2018 - cell.com
Deep learning (DL), a subset of machine learning approaches, has emerged as a versatile
tool to assimilate large amounts of heterogeneous data and provide reliable predictions of …

A real-time phenotyping framework using machine learning for plant stress severity rating in soybean

HS Naik, J Zhang, A Lofquist, T Assefa, S Sarkar… - Plant methods, 2017 - Springer
Background Phenotyping is a critical component of plant research. Accurate and precise trait
collection, when integrated with genetic tools, can greatly accelerate the rate of genetic gain …

A comprehensive review of high throughput phenotyping and machine learning for plant stress phenotyping

T Gill, SK Gill, DK Saini, Y Chopra, JP de Koff… - Phenomics, 2022 - Springer
During the last decade, there has been rapid adoption of ground and aerial platforms with
multiple sensors for phenotyping various biotic and abiotic stresses throughout the …

An explainable deep machine vision framework for plant stress phenotyping

S Ghosal, D Blystone, AK Singh… - Proceedings of the …, 2018 - National Acad Sciences
Current approaches for accurate identification, classification, and quantification of biotic and
abiotic stresses in crop research and production are predominantly visual and require …

Automated phenotyping of plant shoots using imaging methods for analysis of plant stress responses–a review

JF Humplík, D Lazár, A Husičková, L Spíchal - Plant methods, 2015 - Springer
Current methods of in-house plant phenotyping are providing a powerful new tool for plant
biology studies. The self-constructed and commercial platforms established in the last few …

Proximal methods for plant stress detection using optical sensors and machine learning

AV Zubler, JY Yoon - Biosensors, 2020 - mdpi.com
Plant stresses have been monitored using the imaging or spectrometry of plant leaves in the
visible (red-green-blue or RGB), near-infrared (NIR), infrared (IR), and ultraviolet (UV) …

[HTML][HTML] Convolutional neural networks for image-based high-throughput plant phenotyping: a review

Y Jiang, C Li - Plant Phenomics, 2020 - spj.science.org
Plant phenotyping has been recognized as a bottleneck for improving the efficiency of
breeding programs, understanding plant-environment interactions, and managing …

Scaling up high-throughput phenotyping for abiotic stress selection in the field

DT Smith, AB Potgieter, SC Chapman - Theoretical and Applied Genetics, 2021 - Springer
Key message High-throughput phenotyping (HTP) is in its infancy for deployment in large-
scale breeding programmes. With the ability to measure correlated traits associated with …