Machine learning in computer-aided synthesis planning

CW Coley, WH Green, KF Jensen - Accounts of chemical …, 2018 - ACS Publications
Conspectus Computer-aided synthesis planning (CASP) is focused on the goal of
accelerating the process by which chemists decide how to synthesize small molecule …

Prediction of organic reaction outcomes using machine learning

CW Coley, R Barzilay, TS Jaakkola, WH Green… - ACS central …, 2017 - ACS Publications
Computer assistance in synthesis design has existed for over 40 years, yet retrosynthesis
planning software has struggled to achieve widespread adoption. One critical challenge in …

Artificial Intelligence for Retrosynthetic Planning Needs Both Data and Expert Knowledge

F Strieth-Kalthoff, S Szymkuc, K Molga… - Journal of the …, 2024 - ACS Publications
Rapid advancements in artificial intelligence (AI) have enabled breakthroughs across many
scientific disciplines. In organic chemistry, the challenge of planning complex multistep …

Machine learning the ropes: principles, applications and directions in synthetic chemistry

F Strieth-Kalthoff, F Sandfort, MHS Segler… - Chemical Society …, 2020 - pubs.rsc.org
Machine learning (ML) has emerged as a general, problem-solving paradigm with many
applications in computer vision, natural language processing, digital safety, or medicine. By …

Synergy between expert and machine‐learning approaches allows for improved retrosynthetic planning

T Badowski, EP Gajewska, K Molga… - Angewandte Chemie …, 2020 - Wiley Online Library
When computers plan multistep syntheses, they can rely either on expert knowledge or
information machine‐extracted from large reaction repositories. Both approaches suffer from …

Data augmentation and pretraining for template-based retrosynthetic prediction in computer-aided synthesis planning

ME Fortunato, CW Coley, BC Barnes… - Journal of chemical …, 2020 - ACS Publications
This work presents efforts to augment the performance of data-driven machine learning
algorithms for reaction template recommendation used in computer-aided synthesis …

Molecular machine learning: the future of synthetic chemistry?

PM Pflüger, F Glorius - Angewandte Chemie International …, 2020 - Wiley Online Library
During the last decade, modern machine learning has found its way into synthetic chemistry.
Some long‐standing challenges, such as computer‐aided synthesis planning (CASP), have …

Datasets and their influence on the development of computer assisted synthesis planning tools in the pharmaceutical domain

A Thakkar, T Kogej, JL Reymond, O Engkvist… - Chemical …, 2020 - pubs.rsc.org
Computer Assisted Synthesis Planning (CASP) has gained considerable interest as of late.
Herein we investigate a template-based retrosynthetic planning tool, trained on a variety of …

Automated de novo molecular design by hybrid machine intelligence and rule-driven chemical synthesis

A Button, D Merk, JA Hiss, G Schneider - Nature machine intelligence, 2019 - nature.com
Chemical creativity in the design of new synthetic chemical entities (NCEs) with drug-like
properties has been the domain of medicinal chemists. Here, we explore the capability of a …

Predictive chemistry: machine learning for reaction deployment, reaction development, and reaction discovery

Z Tu, T Stuyver, CW Coley - Chemical science, 2023 - pubs.rsc.org
The field of predictive chemistry relates to the development of models able to describe how
molecules interact and react. It encompasses the long-standing task of computer-aided …