A large-scale reaction dataset of mechanistic pathways of organic reactions

S Chen, R Babazade, T Kim, S Han, Y Jung - Scientific Data, 2024 - nature.com
Understanding organic reaction mechanisms is crucial for interpreting the formation of
products at the atomic and electronic level, but still remains as a domain of knowledgeable …

Reproducing Reaction Mechanisms with Machine‐Learning Models Trained on a Large‐Scale Mechanistic Dataset

JF Joung, MH Fong, J Roh, Z Tu… - Angewandte Chemie …, 2024 - Wiley Online Library
Mechanistic understanding of organic reactions can facilitate reaction development, impurity
prediction, and in principle, reaction discovery. While several machine learning models have …

Beyond Major Product Prediction: Reproducing Reaction Mechanisms with Machine Learning Models Trained on a Large-Scale Mechanistic Dataset

JF Joung, MH Fong, J Roh, Z Tu, J Bradshaw… - arXiv preprint arXiv …, 2024 - arxiv.org
Mechanistic understanding of organic reactions can facilitate reaction development, impurity
prediction, and in principle, reaction discovery. While several machine learning models have …

ReactAIvate: A Deep Learning Approach to Predicting Reaction Mechanisms and Unmasking Reactivity Hotspots

A Hoque, M Das, M Baranwal, RB Sunoj - arXiv preprint arXiv:2407.10090, 2024 - arxiv.org
A chemical reaction mechanism (CRM) is a sequence of molecular-level events involving
bond-breaking/forming processes, generating transient intermediates along the reaction …

Pmechdb: A public database of elementary polar reaction steps

M Tavakoli, RJ Miller, MC Angel… - Journal of Chemical …, 2024 - ACS Publications
Most online chemical reaction databases are not publicly accessible or are fully
downloadable. These databases tend to contain reactions in noncanonicalized formats and …

Organic reaction mechanism classification using machine learning

J Burés, I Larrosa - Nature, 2023 - nature.com
A mechanistic understanding of catalytic organic reactions is crucial for the design of new
catalysts, modes of reactivity and the development of greener and more sustainable …

The open reaction database

SM Kearnes, MR Maser, M Wleklinski… - Journal of the …, 2021 - ACS Publications
Chemical reaction data in journal articles, patents, and even electronic laboratory notebooks
are currently stored in various formats, often unstructured, which presents a significant …

Reactants, products, and transition states of elementary chemical reactions based on quantum chemistry

CA Grambow, L Pattanaik, WH Green - Scientific data, 2020 - nature.com
Reaction times, activation energies, branching ratios, yields, and many other quantitative
attributes are important for precise organic syntheses and generating detailed reaction …

ReactionPredictor: prediction of complex chemical reactions at the mechanistic level using machine learning

MA Kayala, P Baldi - Journal of chemical information and …, 2012 - ACS Publications
Proposing reasonable mechanisms and predicting the course of chemical reactions is
important to the practice of organic chemistry. Approaches to reaction prediction have …

Machine-learning-guided discovery of electrochemical reactions

AF Zahrt, Y Mo, KY Nandiwale, R Shprints… - Journal of the …, 2022 - ACS Publications
The molecular structures synthesizable by organic chemists dictate the molecular functions
they can create. The invention and development of chemical reactions are thus critical for …