Monitoring ssDNA Binding to the DnaB Helicase from Helicobacter pylori by Solid‐State NMR Spectroscopy

T Wiegand, R Cadalbert, C Gardiennet… - Angewandte Chemie …, 2016 - Wiley Online Library
DnaB helicases are bacterial, ATP‐driven enzymes that unwind double‐stranded DNA
during DNA replication. Herein, we study the sequential binding of the “non‐hydrolysable” …

A Sedimented Sample of a 59 kDa Dodecameric Helicase Yields High‐Resolution Solid‐State NMR Spectra

C Gardiennet, AK Schütz, A Hunkeler… - Angewandte Chemie …, 2012 - Wiley Online Library
Solid-state NMR spectroscopy has developed into a useful method for protein structure
determination. In contrast to diffraction methods, NMR spectroscopy does not rely on long …

Protein–nucleotide contacts in motor proteins detected by DNP-enhanced solid-state NMR

T Wiegand, WC Liao, TC Ong, A Däpp… - Journal of biomolecular …, 2017 - Springer
DNP (dynamic nuclear polarization)-enhanced solid-state NMR is employed to directly
detect protein–DNA and protein–ATP interactions and identify the residue type establishing …

The conformational changes coupling ATP hydrolysis and translocation in a bacterial DnaB helicase

T Wiegand, R Cadalbert, D Lacabanne… - Nature …, 2019 - nature.com
DnaB helicases are motor proteins that couple ATP-hydrolysis to the loading of the protein
onto DNA at the replication fork and to translocation along DNA to separate double-stranded …

DNA binding activity of Helicobacter pylori DnaB helicase: the role of the N‐terminal domain in modulating DNA binding activities

RG Nitharwal, V Verma, N Subbarao… - The FEBS …, 2012 - Wiley Online Library
Replicative helicases are major motor proteins essential for chromosomal DNA replication in
prokaryotes. Usually hexameric in solution, their DNA binding property must have different …

Paramagnetic Solid‐State NMR to Localize the Metal‐Ion Cofactor in an Oligomeric DnaB Helicase

J Zehnder, R Cadalbert, L Terradot… - … A European Journal, 2021 - Wiley Online Library
Paramagnetic metal ions can be inserted into ATP‐fueled motor proteins by exchanging the
diamagnetic Mg2+ cofactor with Mn2+ or Co2+. Then, paramagnetic relaxation …

Spectroscopic glimpses of the transition state of ATP hydrolysis trapped in a bacterial DnaB helicase

AA Malär, N Wili, LA Völker, MI Kozlova… - Nature …, 2021 - nature.com
The ATP hydrolysis transition state of motor proteins is a weakly populated protein state that
can be stabilized and investigated by replacing ATP with chemical mimics. We present …

NMR structure of the N-terminal domain of E. coli DnaB helicase: implications for structure rearrangements in the helicase hexamer

J Weigelt, SE Brown, CS Miles, NE Dixon, G Otting - Structure, 1999 - cell.com
Background: DnaB is the primary replicative helicase in Escherichia coli. Native DnaB is a
hexamer of identical subunits, each consisting of a larger C-terminal domain and a smaller …

Three-Dimensional Structure of N-Terminal Domain of DnaB Helicase and Helicase-Primase Interactions in Helicobacter pylori

T Kashav, R Nitharwal, SA Abdulrehman… - PLoS …, 2009 - journals.plos.org
Replication initiation is a crucial step in genome duplication and homohexameric DnaB
helicase plays a central role in the replication initiation process by unwinding the duplex …

The domain structure of Helicobacter pylori DnaB helicase: the N-terminal domain can be dispensable for helicase activity whereas the extreme C …

RG Nitharwal, S Paul, A Dar… - Nucleic acids …, 2007 - academic.oup.com
Hexameric DnaB type replicative helicases are essential for DNA strand unwinding along
with the direction of replication fork movement. These helicases in general contain an amino …