Innate immunity plays a key role in controlling viral load in COVID-19: mechanistic insights from a whole-body infection dynamics model

P Dogra, J Ruiz-Ramírez, K Sinha… - ACS pharmacology & …, 2020 - ACS Publications
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a pathogen of immense
public health concern. Efforts to control the disease have only proven mildly successful, and …

Iterative community-driven development of a SARS-CoV-2 tissue simulator

M Getz, Y Wang, G An, M Asthana, A Becker… - BioRxiv, 2020 - biorxiv.org
The 2019 novel coronavirus, SARS-CoV-2, is an emerging pathogen of critical significance
to international public health. Knowledge of the interplay between molecular-scale virus …

Modelling SARS-CoV-2 dynamics: implications for therapy

KS Kim, K Ejima, Y Ito, S Iwanami, H Ohashi, Y Koizumi… - MedRxiv, 2020 - medrxiv.org
The scientific community is focussed on developing antiviral therapies to mitigate the
impacts of the ongoing novel coronavirus disease (COVID-19) outbreak. This will be …

Within‐host dynamics of SARS‐CoV‐2 infection: a systematic review and meta‐analysis

Z Du, S Wang, Y Bai, C Gao, EHY Lau… - Transboundary and …, 2022 - Wiley Online Library
Within‐host model specified by viral dynamic parameters is a mainstream tool to understand
SARS‐CoV‐2 replication cycle in infected patients. The parameter uncertainty further affects …

Comparing antiviral strategies against COVID-19 via multiscale within-host modelling

F Fatehi, RJ Bingham, EC Dykeman… - Royal Society …, 2021 - royalsocietypublishing.org
Within-host models of COVID-19 infection dynamics enable the merits of different forms of
antiviral therapy to be assessed in individual patients. A stochastic agent-based model of …

Modelling upper respiratory viral load dynamics of SARS-CoV-2

JD Challenger, CY Foo, Y Wu, AWC Yan… - BMC medicine, 2022 - Springer
Relationships between viral load, severity of illness, and transmissibility of virus are
fundamental to understanding pathogenesis and devising better therapeutic and prevention …

In silico dynamics of COVID-19 phenotypes for optimizing clinical management

C Voutouri, MR Nikmaneshi… - Proceedings of the …, 2021 - National Acad Sciences
Understanding the underlying mechanisms of COVID-19 progression and the impact of
various pharmaceutical interventions is crucial for the clinical management of the disease …

A quantitative model used to compare within-host SARS-CoV-2, MERS-CoV, and SARS-CoV dynamics provides insights into the pathogenesis and treatment of SARS …

KS Kim, K Ejima, S Iwanami, Y Fujita, H Ohashi… - PLoS …, 2021 - journals.plos.org
The scientific community is focused on developing antiviral therapies to mitigate the impacts
of the ongoing novel coronavirus disease 2019 (COVID-19) outbreak. This will be facilitated …

Kinetics of SARS-CoV-2 infection in the human upper and lower respiratory tracts and their relationship with infectiousness

R Ke, C Zitzmann, RM Ribeiro, AS Perelson - MedRxiv, 2020 - medrxiv.org
SARS-CoV-2 is a human pathogen that causes infection in both the upper respiratory tract
(URT) and the lower respiratory tract (LRT). The viral kinetics of SARS-CoV-2 infection and …

Transcriptomics-inferred dynamics of SARS-CoV-2 interactions with host epithelial cells

L Adam, M Stanifer, F Springer, J Mathony, M Brune… - Science …, 2023 - science.org
Virus-host interactions can reveal potentially effective and selective therapeutic targets for
treating infection. Here, we performed an integrated analysis of the dynamics of virus …