[HTML][HTML] Whole slide image registration via multi-stained feature matching

MZ Hoque, A Keskinarkaus, P Nyberg, T Mattila… - Computers in Biology …, 2022 - Elsevier
In the recent decade, medical image registration and fusion process has emerged as an
effective application to follow up diseases and decide the necessary therapies based on the …

[HTML][HTML] RegWSI: Whole slide image registration using combined deep feature-and intensity-based methods: Winner of the ACROBAT 2023 challenge

M Wodzinski, N Marini, M Atzori, H Müller - Computer Methods and …, 2024 - Elsevier
Background and objective The automatic registration of differently stained whole slide
images (WSIs) is crucial for improving diagnosis and prognosis by fusing complementary …

Robust quad-tree based registration on whole slide images

C Marzahl, F Wilm, L Tharun, S Perner… - MICCAI Workshop …, 2021 - proceedings.mlr.press
The registration of whole slide images (WSIs) provides the basis for many subsequent
processing steps in digital pathology. For instance, the registration of immunohistochemistry …

Regional registration of whole slide image stacks containing major histological artifacts

M Paknezhad, SYM Loh, Y Choudhury, VKC Koh… - BMC …, 2020 - Springer
Background High resolution 2D whole slide imaging provides rich information about the
tissue structure. This information can be a lot richer if these 2D images can be stacked into a …

A hierarchical and multi-view registration of serial histopathological images

Z Chen, S Zhao, K Hu, J Han, Y Ji, S Ling… - Pattern Recognition …, 2021 - Elsevier
Serial histopathological images sliced from the same biopsy section exhibit quite similar
topological structures. They are usually stained with different dyes and inspected …

Patch-based nonlinear image registration for gigapixel whole slide images

J Lotz, J Olesch, B Müller, T Polzin… - IEEE Transactions …, 2015 - ieeexplore.ieee.org
Objective: Image registration of whole slide histology images allows the fusion of fine-
grained information—like different immunohistochemical stains—from neighboring tissue …

Multistep, automatic and nonrigid image registration method for histology samples acquired using multiple stains

M Wodzinski, A Skalski - Physics in Medicine & Biology, 2021 - iopscience.iop.org
The use of multiple dyes during histological sample preparation can reveal distinct tissue
properties. However, since the slide preparation differs for each dye, the tissue slides are …

ANHIR: automatic non-rigid histological image registration challenge

J Borovec, J Kybic, I Arganda-Carreras… - IEEE transactions on …, 2020 - ieeexplore.ieee.org
Automatic Non-rigid Histological Image Registration (ANHIR) challenge was organized to
compare the performance of image registration algorithms on several kinds of microscopy …

Multi-stained whole slide image alignment in digital pathology

O Déniz, D Toomey, C Conway… - Medical Imaging 2015 …, 2015 - spiedigitallibrary.org
In Digital Pathology, one of the most simple and yet most useful feature is the ability to view
serial sections of tissue simultaneously on a computer monitor. This enables the pathologist …

Benchmarking of image registration methods for differently stained histological slides

J Borovec, A Munoz-Barrutia… - 2018 25th IEEE …, 2018 - ieeexplore.ieee.org
Image registration is a common task for many biomedical analysis applications. The present
work focuses on the benchmarking of registration methods on differently stained histological …