Chromosome‐level genome assembly of the greenfin horse‐faced filefish (Thamnaconus septentrionalis) using Oxford Nanopore PromethION sequencing and Hi‐C …

L Bian, F Li, J Ge, P Wang, Q Chang… - Molecular Ecology …, 2020 - Wiley Online Library
The greenfin horse‐faced filefish, Thamnaconus septentrionalis, is a valuable commercial
fish species that is widely distributed in the Indo‐West Pacific Ocean. This fish has …

Chromosome‐level genome assembly of a cyprinid fish Onychostoma macrolepis by integration of nanopore sequencing, Bionano and Hi‐C technology

L Sun, T Gao, F Wang, Z Qin, L Yan… - Molecular ecology …, 2020 - Wiley Online Library
Onychostoma macrolepis is an emerging commercial cyprinid fish species. It is a model
system for studies of sexual dimorphism and genome evolution. Here, we report the …

Chromosome-level assembly and gene annotation of Decapterus maruadsi genome using Nanopore and Hi-C technologies

L Chen, Z Zhou, Z Zhou, J Yang, Y Deng, Y Bai, F Pu… - Scientific Data, 2024 - nature.com
Decapterus maruadsi is one of the representative offshore fish in the Western Pacific. Since
the last century, it has become a commercially valuable marine fishery species in the …

De novo assembly of a chromosome‐level reference genome of red‐spotted grouper (Epinephelus akaara) using nanopore sequencing and Hi‐C

H Ge, K Lin, M Shen, S Wu, Y Wang… - Molecular ecology …, 2019 - Wiley Online Library
The red‐spotted grouper Epinephelus akaara (E. akaara) is one of the most economically
important marine fish in China, Japan and South‐East Asia and is a threatened species. The …

Chromosomal-level assembly of yellow catfish genome using third-generation DNA sequencing and Hi-C analysis

G Gong, C Dan, S Xiao, W Guo, P Huang, Y Xiong… - …, 2018 - academic.oup.com
Abstract Background The yellow catfish, Pelteobagrus fulvidraco, belonging to the
Siluriformes order, is an economically important freshwater aquaculture fish species in Asia …

A pilot study for channel catfish whole genome sequencing and de novo assembly

Y Jiang, J Lu, E Peatman, H Kucuktas, S Liu, S Wang… - BMC genomics, 2011 - Springer
Background Recent advances in next-generation sequencing technologies have drastically
increased throughput and significantly reduced sequencing costs. However, the average …

Chromosome-level genome assembly of largemouth bass (Micropterus salmoides) using PacBio and Hi-C technologies

K He, L Zhao, Z Yuan, A Canario, Q Liu, S Chen, J Guo… - Scientific Data, 2022 - nature.com
The largemouth bass (Micropterus salmoides) has become a cosmopolitan species due to
its widespread introduction as game or domesticated fish. Here a high-quality chromosome …

Draft Genome Assembly of the Freshwater Apex Predator Wels Catfish (Silurus glanis) Using Linked-Read Sequencing

MY Ozerov, M Flajšhans, K Noreikiene… - G3: Genes …, 2020 - academic.oup.com
The wels catfish (Silurus glanis) is one of the largest freshwater fish species in the world.
This top predator plays a key role in ecosystem stability, and represents an iconic trophy-fish …

High-quality genome assembly of channel catfish, Ictalurus punctatus

X Chen, L Zhong, C Bian, P Xu, Y Qiu, X You… - …, 2016 - academic.oup.com
Abstract Background The channel catfish (Ictalurus punctatus), a species native to North
America, is one of the most important commercial freshwater fish in the world, especially in …

Draft genome of the lined seahorse, Hippocampus erectus

Q Lin, Y Qiu, R Gu, M Xu, J Li, C Bian, H Zhang… - …, 2017 - academic.oup.com
Abstract Background: The lined seahorse, Hippocampus erectus, is an Atlantic species and
mainly inhabits shallow sea beds or coral reefs. It has become very popular in China for its …