[HTML][HTML] Single cell transcriptomics identifies focal segmental glomerulosclerosis remission endothelial biomarker

R Menon, EA Otto, P Hoover, S Eddy, L Mariani… - JCI insight, 2020 - ncbi.nlm.nih.gov
To define cellular mechanisms underlying kidney function and failure, the KPMP analyzes
biopsy tissue in a multicenter research network to build cell-level process maps of the …

Human kidney tubule-specific gene expression based dissection of chronic kidney disease traits

P Beckerman, C Qiu, J Park, N Ledo, YA Ko… - …, 2017 - thelancet.com
Chronic kidney disease (CKD) has diverse phenotypic manifestations including structural
(such as fibrosis) and functional (such as glomerular filtration rate and albuminuria) …

Single-cell RNA sequencing reveals the mesangial identity and species diversity of glomerular cell transcriptomes

B He, P Chen, S Zambrano, D Dabaghie, Y Hu… - Nature …, 2021 - nature.com
Molecular characterization of the individual cell types in human kidney as well as model
organisms are critical in defining organ function and understanding translational aspects of …

[HTML][HTML] Urine single-cell RNA sequencing in focal segmental glomerulosclerosis reveals inflammatory signatures

KZ Latt, J Heymann, JH Jessee, AZ Rosenberg… - Kidney international …, 2022 - Elsevier
Introduction Individuals with focal segmental glomerular sclerosis (FSGS) typically undergo
kidney biopsy only once, which limits the ability to characterize kidney cell gene expression …

[HTML][HTML] Design of the Nephrotic Syndrome Study Network (NEPTUNE) to evaluate primary glomerular nephropathy by a multidisciplinary approach

CA Gadegbeku, DS Gipson, LB Holzman, AO Ojo… - Kidney international, 2013 - Elsevier
The Nephrotic Syndrome Study Network (NEPTUNE) is a North American multicenter
collaborative consortium established to develop a translational research infrastructure for …

[HTML][HTML] Integration of spatial and single-cell transcriptomics localizes epithelial cell–immune cross-talk in kidney injury

RM Ferreira, AR Sabo, S Winfree, KS Collins… - JCI insight, 2021 - ncbi.nlm.nih.gov
Single-cell sequencing studies have characterized the transcriptomic signature of cell types
within the kidney. However, the spatial distribution of acute kidney injury (AKI) is regional …

Advantages of single-nucleus over single-cell RNA sequencing of adult kidney: rare cell types and novel cell states revealed in fibrosis

H Wu, Y Kirita, EL Donnelly… - Journal of the American …, 2019 - journals.lww.com
Background A challenge for single-cell genomic studies in kidney and other solid tissues is
generating a high-quality single-cell suspension that contains rare or difficult-to-dissociate …

Single-cell transcriptome profiling of the kidney glomerulus identifies key cell types and reactions to injury

JJ Chung, L Goldstein, YJJ Chen, J Lee… - Journal of the …, 2020 - journals.lww.com
Background The glomerulus is a specialized capillary bed that is involved in urine
production and BP control. Glomerular injury is a major cause of CKD, which is epidemic …

Single-cell transcriptomics reveals common epithelial response patterns in human acute kidney injury

C Hinze, C Kocks, J Leiz, N Karaiskos, A Boltengagen… - Genome Medicine, 2022 - Springer
Background Acute kidney injury (AKI) occurs frequently in critically ill patients and is
associated with adverse outcomes. Cellular mechanisms underlying AKI and kidney cell …

[HTML][HTML] Deep learning–based molecular morphometrics for kidney biopsies

M Zimmermann, M Klaus, MN Wong, AK Thebille… - JCI insight, 2021 - ncbi.nlm.nih.gov
Morphologic examination of tissue biopsies is essential for histopathological diagnosis.
However, accurate and scalable cellular quantification in human samples remains …