Building Multi-Source Semantic Knowledge Graph for Drug Repositioning

Z Han, A Xinyu, L Chunhe - Data Analysis and Knowledge …, 2022 - manu44.magtech.com.cn
[Objective] This paper constructs a cross-platform semantic knowledge graph with whole
datasets, which helps us find novel drug knowledge.[Methods] First, we developed a new …

Knowledge Graph Convolutional Network with Heuristic Search for Drug Repositioning

X Du, X Sun, M Li - Journal of Chemical Information and Modeling, 2024 - ACS Publications
Drug repositioning is a strategy of repurposing approved drugs for treating new indications,
which can accelerate the drug discovery process, reduce development costs, and lower the …

A Multimodal Framework for Improving in Silico Drug Repositioning With the Prior Knowledge From Knowledge Graphs

Z Xiong, F Huang, Z Wang, S Liu… - IEEE/ACM Transactions …, 2021 - ieeexplore.ieee.org
Drug repositioning/repurposing is a very important approach towards identifying novel
treatments for diseases in drug discovery. Recently, large-scale biological datasets are …

[HTML][HTML] The OREGANO knowledge graph for computational drug repurposing

M Boudin, G Diallo, M Drancé, F Mougin - Scientific data, 2023 - nature.com
Drug repositioning is a faster and more affordable solution than traditional drug discovery
approaches. From this perspective, computational drug repositioning using knowledge …

Drug Repositioning using Consilience of Knowledge Graph Completion Methods

R Tu, M Sinha, C González, E Hu, S Dhuliawala… - bioRxiv, 2023 - biorxiv.org
Motivation While link prediction methods in knowledge graphs have been increasingly
utilized to locate potential associations between compounds and diseases, they suffer from …

Learning a Patent-Informed Biomedical Knowledge Graph Reveals Technological Potential of Drug Repositioning Candidates

Y Jegal, J Choi, J Lee, KS Park, S Lee… - arXiv preprint arXiv …, 2023 - arxiv.org
Drug repositioning-a promising strategy for discovering new therapeutic uses for existing
drugs-has been increasingly explored in the computational science literature using …

MPTN: A message-passing transformer network for drug repurposing from knowledge graph

Y Liu, G Sang, Z Liu, Y Pan, J Cheng… - Computers in Biology and …, 2024 - Elsevier
Drug repurposing (DR) based on knowledge graphs (KGs) is challenging, which uses
knowledge graph reasoning models to predict new therapeutic pathways for existing drugs …

Demystifying drug repurposing domain comprehension with knowledge graph embedding

E Ramalli, A Parravicini, GW Di Donato… - … Circuits and Systems …, 2021 - ieeexplore.ieee.org
Drug repurposing is more relevant than ever due to drug development's rising costs and the
need to respond to emerging diseases quickly. Knowledge graph embedding enables drug …

Explaining Drug Repositioning: A Case-Based Reasoning Graph Neural Network Approach

AG Cavazos - NeurIPS 2023 Workshop: New Frontiers in Graph … - openreview.net
Drug repositioning, the identification of novel uses of existing therapies, has become an
attractive strategy to accelerate drug development. Knowledge graphs (KGs) have emerged …

A literature-based knowledge graph embedding method for identifying drug repurposing opportunities in rare diseases

DN Sosa, A Derry, M Guo, E Wei, C Brinton… - Pacific Symposium on …, 2019 - World Scientific
Millions of Americans are affected by rare diseases, many of which have poor survival rates.
However, the small market size of individual rare diseases, combined with the time and …