Clinical application of nanopore-targeted sequencing technology in bronchoalveolar lavage fluid from patients with pulmonary infections

J Ye, K Huang, Y Xu, N Chen, Y Tu, J Huang… - Microbiology …, 2024 - Am Soc Microbiol
The rapid and effective identification of pathogens in patients with pulmonary infections has
posed a persistent challenge in medicine, with conventional microbiological tests (CMTs) …

The application of nanopore targeted sequencing for pathogen diagnosis in bronchoalveolar lavage fluid of patients with pneumonia: a prospective multicenter study

Q Lin, Y Yao, X Li, S Zhang, H Guo, X Ma… - Infectious …, 2024 - Taylor & Francis
Objective To evaluate the value of nanopore targeted sequencing in diagnosing pneumonia
pathogens. Methods This large-scale multicentre prospective study performed in 8 hospitals …

[HTML][HTML] A preliminary evaluation of targeted nanopore sequencing technology for the detection of Mycobacterium tuberculosis in bronchoalveolar lavage fluid …

X Sun, J Song, X Leng, F Li, H Wang, J He… - Frontiers in Cellular …, 2023 - frontiersin.org
Objective To evaluate the efficacy of targeted nanopore sequencing technology for the
detection of Mycobacterium tuberculosis (M. tb.) in bronchoalveolar lavage fluid (BALF) …

Clinical performance of nanopore targeted sequencing for diagnosing infectious diseases

Y Fu, Q Chen, M Xiong, J Zhao, S Shen… - Microbiology …, 2022 - Am Soc Microbiol
The gold standard for confirming bacterial infections is culture-positive, which has a long
sample-to-result turnaround time and poor sensitivity for unculturable and fastidious …

[HTML][HTML] Nanopore-based metagenomic sequencing in respiratory tract infection: a developing diagnostic platform

R Chapman, L Jones, A D'Angelo, A Suliman, M Anwar… - Lung, 2023 - Springer
Respiratory tract infection (RTI) remains a significant cause of morbidity and mortality across
the globe. The optimal management of RTI relies upon timely pathogen identification via …

[HTML][HTML] Targeted nanopore sequencing using clinical specimens for the rapid diagnosis of extrapulmonary tuberculosis

G Yu, L Fang, Y Shen, F Zhong, X Xu - BMC Infectious Diseases, 2024 - Springer
Background The clinical presentation of extrapulmonary tuberculosis (EPTB) is atypical and
it is easily confused with other diseases such as common infections, making prompt …

[HTML][HTML] Potential utility of targeted Nanopore sequencing for improving etiologic diagnosis of bacterial and fungal respiratory infection

WS Chan, CH Au, SM Leung, DN Ho, EYL Wong… - Diagnostic …, 2020 - Springer
Background Diversified etiology of lower respiratory tract infection renders diagnosis
challenging. The mainstay microbial culture is time-consuming and constrained by variable …

Comparison of third-generation sequencing technology and traditional microbiological detection in pathogen diagnosis of lower respiratory tract infection

W Luo, Y He, J Xu, S Zhang, C Li, J Lv… - Discovery …, 2023 - pubmed.ncbi.nlm.nih.gov
Background It is common to obtain a low detection rate and unsatisfactory detection results
in complex infection or rare pathogen detection. This retrospective study aimed to illustrate …

[HTML][HTML] Application of Nanopore sequencing in the diagnosis and treatment of pulmonary infections

J Chen, F Xu - Molecular Diagnosis & Therapy, 2023 - Springer
This review provides an in-depth discussion of the development, principles and utility of
nanopore sequencing technology and its diverse applications in the identification of various …

[HTML][HTML] A dual-process of targeted and unbiased Nanopore sequencing enables accurate and rapid diagnosis of lower respiratory infections

Y Guo, Z Li, L Li, S Li, L Sun, X Yang, Y Dai, J Gu… - …, 2023 - thelancet.com
Background Nanopore metagenomics has been used for infectious disease diagnosis for
bacterial pathogens. However, this technology currently lacks comprehensive performance …