Data integration challenges for machine learning in precision medicine

M Martínez-García, E Hernández-Lemus - Frontiers in medicine, 2022 - frontiersin.org
A main goal of Precision Medicine is that of incorporating and integrating the vast corpora on
different databases about the molecular and environmental origins of disease, into analytic …

Precision medicine needs pioneering clinical bioinformaticians

G Gómez-López, J Dopazo, JC Cigudosa… - Briefings in …, 2019 - academic.oup.com
Success in precision medicine depends on accessing high-quality genetic and molecular
data from large, well-annotated patient cohorts that couple biological samples to …

Visualisation of integrated patient-centric data as pathways: Enhancing electronic medical records in clinical practice

JH Bettencourt-Silva, GS Mannu… - … State-of-the-Art and Future …, 2016 - Springer
Routinely collected data in hospital Electronic Medical Records (EMR) is rich and abundant
but often not linked or analysed for purposes other than direct patient care. We have created …

Cloud Computing in Bioinformatics: current solutions and challenges

B Calabrese, M Cannataro - 2016 - peerj.com
METHODS This work reviews main academic and industrial cloud-based bioinformatics
solutions developed in the recent years; moreover, it underlines main issues and problems …

Ep4a: Software and computer based simulator research: Development and outlook sofa—An open source framework for medical simulation

C Duriez, J Allard, F Faure, PJ Bensoussan… - Simulation in …, 2007 - journals.lww.com
METHODS For the past few years, there have been a few attempts at designing software
toolkits for medical simulation 1–4 Although our aim is identical, we propose a different …

Development of a visualization tool for healthcare decision-making using electronic medical records: A systems approach to viewing a patient record

GA Mandell, MB Keating… - 2022 IEEE International …, 2022 - ieeexplore.ieee.org
Healthcare delivery systems are widely accepted as socio-technical systems. Unlike other
socio-technical systems, healthcare systems leave very little decision-making to technical …

Integrating heterogeneous biomedical data for cancer research: the CARPEM infrastructure

B Rance, V Canuel, H Countouris… - Applied clinical …, 2016 - thieme-connect.com
Cancer research involves numerous disciplines. The multiplicity of data sources and their
heterogeneous nature render the integration and the exploration of the data more and more …

Fine-grained supervision and restriction of biomedical applications in linux containers

M Witt, C Jansen, D Krefting… - 2017 17th IEEE/ACM …, 2017 - ieeexplore.ieee.org
Applications for data analysis of biomedical data are complex programs and often consist of
multiple components. Re-usage of existing solutions from external code repositories or …

Precision medicine informatics

LJ Frey, EV Bernstam, JC Denny - Journal of the American …, 2016 - academic.oup.com
This special issue on precision medicine informatics flowed from the AMIA 2015
Translational Bioinformatics Summit theme of “Accelerating Precision Medicine” 1 and …

Openice: An open, interoperable platform for medical cyber-physical systems

J Plourde, D Arney, JM Goldman - 2014 ACM/IEEE …, 2014 - ieeexplore.ieee.org
Medical devices in hospitals and other clinical settings are not yet networked with each
other. This leads to compartmentalization and siloing of information, false positive alarms …