Single-cell spatial landscapes of the lung tumour immune microenvironment

M Sorin, M Rezanejad, E Karimi, B Fiset, L Desharnais… - Nature, 2023 - nature.com
Single-cell technologies have revealed the complexity of the tumour immune
microenvironment with unparalleled resolution,,,,,,,–. Most clinical strategies rely on …

Conservation of immune gene signatures in solid tumors and prognostic implications

J Chifman, A Pullikuth, JW Chou, D Bedognetti… - BMC cancer, 2016 - Springer
Background Tumor-infiltrating leukocytes can either limit cancer growth or facilitate its
spread. Diagnostic strategies that comprehensively assess the functional complexity of …

A single‐cell RNA expression atlas of normal, preneoplastic and tumorigenic states in the human breast

B Pal, Y Chen, F Vaillant, BD Capaldo, R Joyce… - The EMBO …, 2021 - embopress.org
To examine global changes in breast heterogeneity across different states, we determined
the single‐cell transcriptomes of> 340,000 cells encompassing normal breast, preneoplastic …

Analysis of single-cell RNA-seq identifies cell-cell communication associated with tumor characteristics

MP Kumar, J Du, G Lagoudas, Y Jiao, A Sawyer… - Cell reports, 2018 - cell.com
Tumor ecosystems are composed of multiple cell types that communicate by ligand-receptor
interactions. Targeting ligand-receptor interactions (for instance, with immune checkpoint …

[HTML][HTML] Landscape of infiltrating T cells in liver cancer revealed by single-cell sequencing

C Zheng, L Zheng, JK Yoo, H Guo, Y Zhang, X Guo… - Cell, 2017 - cell.com
Systematic interrogation of tumor-infiltrating lymphocytes is key to the development of
immunotherapies and the prediction of their clinical responses in cancers. Here, we perform …

Systemic dysfunction and plasticity of the immune macroenvironment in cancer models

BM Allen, KJ Hiam, CE Burnett, A Venida, R DeBarge… - Nature medicine, 2020 - nature.com
Understanding of the factors governing immune responses in cancer remains incomplete,
limiting patient benefit. In this study, we used mass cytometry to define the systemic immune …

Relevance of tumor-infiltrating immune cell composition and functionality for disease outcome in breast cancer

RD Bense, C Sotiriou… - Journal of the …, 2017 - academic.oup.com
Background: Not all breast cancer patients benefit from neoadjuvant or adjuvant therapy,
resulting in considerable undertreatment or overtreatment. New insights into the role of …

Interactions between immunity, proliferation and molecular subtype in breast cancer prognosis

S Nagalla, JW Chou, MC Willingham, J Ruiz… - Genome biology, 2013 - Springer
Background Gene expression signatures indicative of tumor proliferative capacity and tumor-
immune cell interactions have emerged as principal biology-driven predictors of breast …

The current landscape of single-cell transcriptomics for cancer immunotherapy

P Guruprasad, YG Lee, KH Kim, M Ruella - Journal of Experimental …, 2020 - rupress.org
Immunotherapies such as immune checkpoint blockade and adoptive cell transfer have
revolutionized cancer treatment, but further progress is hindered by our limited …

Discovering dominant tumor immune archetypes in a pan-cancer census

AJ Combes, B Samad, J Tsui, NW Chew, P Yan… - Cell, 2022 - cell.com
Cancers display significant heterogeneity with respect to tissue of origin, driver mutations,
and other features of the surrounding tissue. It is likely that individual tumors engage …