[HTML][HTML] Classifying breast cancer subtypes on multi-omics data via sparse canonical correlation analysis and deep learning

Y Huang, P Zeng, C Zhong - BMC bioinformatics, 2024 - Springer
Background Classifying breast cancer subtypes is crucial for clinical diagnosis and
treatment. However, the early symptoms of breast cancer may not be apparent. Rapid …

[HTML][HTML] Multi-omics data fusion for cancer molecular subtyping using sparse canonical correlation analysis

L Qi, W Wang, T Wu, L Zhu, L He, X Wang - Frontiers in genetics, 2021 - frontiersin.org
It is now clear that major malignancies are heterogeneous diseases associated with diverse
molecular properties and clinical outcomes, posing a great challenge for more …

[HTML][HTML] An integrative deep learning framework for classifying molecular subtypes of breast cancer

MM Islam, S Huang, R Ajwad, C Chi, Y Wang… - Computational and …, 2020 - Elsevier
Classification of breast cancer subtypes using multi-omics profiles is a difficult problem since
the data sets are high-dimensional and highly correlated. Deep neural network (DNN) …

RNA‐Seq‐Based Breast Cancer Subtypes Classification Using Machine Learning Approaches

Z Yu, Z Wang, X Yu, Z Zhang - Computational intelligence and …, 2020 - Wiley Online Library
Background. Breast invasive carcinoma (BRCA) is not a single disease as each subtype has
a distinct morphology structure. Although several computational methods have been …

[HTML][HTML] moBRCA-net: a breast cancer subtype classification framework based on multi-omics attention neural networks

JM Choi, H Chae - BMC bioinformatics, 2023 - Springer
Background Breast cancer is a highly heterogeneous disease that comprises multiple
biological components. Owing its diversity, patients have different prognostic outcomes; …

Identification of cancer subtypes by integrating multiple types of transcriptomics data with deep learning in breast cancer

Y Guo, X Shang, Z Li - Neurocomputing, 2019 - Elsevier
The identification of cancer subtypes is vital to advance the precision of cancer disease
diagnosis and therapy. Several works had been done to integrate multiple types of …

Glassonet: Identifying discriminative gene sets among molecular subtypes of breast cancer

S Liu, Y Zhang, X Shang - IEEE/ACM Transactions on …, 2022 - ieeexplore.ieee.org
Breast cancer is a heterogeneous disease caused by various alterations in the genome or
transcriptome. Molecular subtypes of breast cancer have been reported, but useful …

Moanna: multi-omics autoencoder-based neural network algorithm for predicting breast cancer subtypes

R Lupat, R Perera, S Loi, J Li - IEEE Access, 2023 - ieeexplore.ieee.org
Cancer subtyping delivers valuable insights into the study of cancer heterogeneity and
fulfills an essential step toward personalized medicine. For example, studies in breast …

Attention-based GCN integrates multi-omics data for breast cancer subtype classification and patient-specific gene marker identification

H Guo, X Lv, Y Li, M Li - Briefings in Functional Genomics, 2023 - academic.oup.com
Breast cancer is a heterogeneous disease and can be divided into several subtypes with
unique prognostic and molecular characteristics. The classification of breast cancer …

Investigating deep learning based breast cancer subtyping using pan-cancer and multi-omic data

F Cristovao, S Cascianelli, A Canakoglu… - IEEE/ACM …, 2020 - ieeexplore.ieee.org
Breast Cancer comprises multiple subtypes implicated in prognosis. Existing stratification
methods rely on the expression quantification of small gene sets. Next Generation …