A novel genome analysis method with the entropy-based numerical techniqueusing pretrained convolutional neural networks

B DAŞ, S Toraman… - Turkish Journal of Electrical …, 2020 - journals.tubitak.gov.tr
The identification of DNA sequences as exon and intron is a common problem in genome
analysis. The methods used for feature extraction and mapping techniques for the …

A novel numerical mapping method based on entropy for digitizing DNA sequences

B Das, I Turkoglu - Neural Computing and Applications, 2018 - Springer
Recently, digital signal processing has been widely applied in the study of genomics. One of
the genomic studies is identification of protein-coding regions. Where is a protein coded …

[HTML][HTML] The effect of numerical mapping techniques on performance in genomic research

SN Gülocak, DAŞ Bihter - Sakarya University Journal of …, 2022 - saucis.sakarya.edu.tr
In genomic signal processing applications, digitization of these signals is needed to process
and analyze DNA signals. In the digitization process, the mapping technique to be chosen …

DNA sequence classification by convolutional neural network

NG Nguyen, VA Tran, D Phan… - Journal …, 2016 - repository.lppm.unila.ac.id
In recent years, a deep learning model called convolutional neural network with an ability of
extracting features of high-level abstraction from minimum preprocessing data has been …

A deep learning CNN model for genome sequence classification

H Gunasekaran, K Ramalakshmi… - … for COVID-19, 2021 - taylorfrancis.com
The COVID-19 pandemic declared by the World Health Organization in March 2020 is a
global challenge. This has drawn research interest in various fields, such as drug design …

[PDF][PDF] Genomic analysis and classification of exon and intron sequences using DNA numerical mapping techniques

M Abo-Zahhad, SM Ahmed… - International Journal of …, 2012 - Citeseer
Using digital signal processing in genomic field is a key of solving most problems in this
area such as prediction of gene locations in a genomic sequence and identifying the defect …

Deep learning for the classification of genomic signals

JA Morales, R Saldaña… - Mathematical …, 2020 - Wiley Online Library
Genomic signal processing (GSP) is based on the use of digital signal processing methods
for the analysis of genomic data. Convolutional neural networks (CNN) are the state‐of‐the …

A new DNA sequence entropy-based Kullback-Leibler algorithm for gene clustering

H Dehghanzadeh, M Ghaderi-Zefrehei… - Journal of applied …, 2020 - Springer
Abstract Information theory is a branch of mathematics that overlaps with communications,
biology, and medical engineering. Entropy is a measure of uncertainty in the set of …

Enriched dna strands classification using cgr images and convolutional neural network

S Safoury, W Hussein - Proceedings of the 2019 8th international …, 2019 - dl.acm.org
Bioinformatics is the biological study which applies programming techniques for more
understanding and analysis of living objects such as the study of genome structure. The …

A numerical representation method for a DNA sequence using Gray code method

M Raman Kumar, V Naveen Kumar - Soft Computing for Problem Solving …, 2020 - Springer
The exceptional speed in increase of genomic data at public databases requires advanced
computational tools to perform quick gene analysis. The tools can be devised with the aid of …