What's in a 'nym'? Synonyms in Biomedical Ontology Matching

C Pesquita, D Faria, C Stroe, E Santos, IF Cruz… - The Semantic Web …, 2013 - Springer
Abstract To bring the Life Sciences domain closer to a Semantic Web realization it is
fundamental to establish meaningful relations between biomedical ontologies. The …

Compound matching of biomedical ontologies

DPS Oliveira - 2015 - repositorio.ul.pt
Biomedical ontologies are particularly successful in the uniformization of the life sciences
domain. Due to their recent expansion it became a strenuous task to integrate all the …

[PDF][PDF] BLOOMS on AgreementMaker: Results for OAEI 2010

C Pesquita, C Stroe, IF Cruz, FM Couto - Ontology Matching, 2010 - academia.edu
BLOOMS is an ontology matching method developed as part of an ontology extension
system for biomedical ontologies. It combines two lexical similarity measures with similarity …

[HTML][HTML] An effective method of large scale ontology matching

G Diallo - Journal of Biomedical Semantics, 2014 - Springer
Background We are currently facing a proliferation of heterogeneous biomedical data
sources accessible through various knowledge-based applications. These data are …

[HTML][HTML] Tackling the challenges of matching biomedical ontologies

D Faria, C Pesquita, I Mott, C Martins, FM Couto… - Journal of biomedical …, 2018 - Springer
Background Biomedical ontologies pose several challenges to ontology matching due both
to the complexity of the biomedical domain and to the characteristics of the ontologies …

[HTML][HTML] Automatic background knowledge selection for matching biomedical ontologies

D Faria, C Pesquita, E Santos, IF Cruz, FM Couto - PloS one, 2014 - journals.plos.org
Ontology matching is a growing field of research that is of critical importance for the semantic
web initiative. The use of background knowledge for ontology matching is often a key factor …

What four million mappings can tell you about two hundred ontologies

A Ghazvinian, NF Noy, C Jonquet, N Shah… - The Semantic Web …, 2009 - Springer
The field of biomedicine has embraced the Semantic Web probably more than any other
field. As a result, there is a large number of biomedical ontologies covering overlapping …

[HTML][HTML] Improving the interoperability of biomedical ontologies with compound alignments

D Oliveira, C Pesquita - Journal of biomedical semantics, 2018 - Springer
Background Ontologies are commonly used to annotate and help process life sciences data.
Although their original goal is to facilitate integration and interoperability among …

Semantic matching using the UMLS

J Shamdasani, T Hauer, P Bloodsworth… - European Semantic …, 2009 - Springer
Traditional ontology alignment techniques enable equivalence relationships to be
established between concepts in two ontologies with some confidence value. With semantic …

Ontology matching with semantic verification

YR Jean-Mary, EP Shironoshita, MR Kabuka - Journal of Web Semantics, 2009 - Elsevier
Automated Semantic Matching of Ontologies with Verification (ASMOV) is a novel algorithm
that uses lexical and structural characteristics of two ontologies to iteratively calculate a …