A lncRNA regulates alternative splicing via establishment of a splicing-specific chromatin signature

I Gonzalez, R Munita, E Agirre, TA Dittmer… - Nature structural & …, 2015 - nature.com
Alternative pre-mRNA splicing is a highly cell type–specific process essential to generating
protein diversity. However, the mechanisms responsible for the establishment and …

[HTML][HTML] Epigenetic regulation of alternative splicing: how LncRNAs tailor the message

G Pisignano, M Ladomery - Non-coding RNA, 2021 - mdpi.com
Alternative splicing is a highly fine-tuned regulated process and one of the main drivers of
proteomic diversity across eukaryotes. The vast majority of human multi-exon genes is …

[HTML][HTML] Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins

SC Huelga, AQ Vu, JD Arnold, TY Liang, PP Liu… - Cell reports, 2012 - cell.com
Understanding how RNA binding proteins control the splicing code is fundamental to human
biology and disease. Here, we present a comprehensive study to elucidate how …

Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches

M Chen, JL Manley - Nature reviews Molecular cell biology, 2009 - nature.com
Alternative splicing of mRNA precursors provides an important means of genetic control and
is a crucial step in the expression of most genes. Alternative splicing markedly affects human …

RNA G-quadruplex secondary structure promotes alternative splicing via the RNA-binding protein hnRNPF

H Huang, J Zhang, SE Harvey, X Hu… - Genes & …, 2017 - genesdev.cshlp.org
It is generally thought that splicing factors regulate alternative splicing through binding to
RNA consensus sequences. In addition to these linear motifs, RNA secondary structure is …

[HTML][HTML] Epigenetics in alternative pre-mRNA splicing

RF Luco, M Allo, IE Schor, AR Kornblihtt, T Misteli - Cell, 2011 - cell.com
Alternative splicing plays critical roles in differentiation, development, and disease and is a
major source for protein diversity in higher eukaryotes. Analysis of alternative splicing …

Regulation of alternative splicing through coupling with transcription and chromatin structure

S Naftelberg, IE Schor, G Ast… - Annual review of …, 2015 - annualreviews.org
Alternative precursor messenger RNA (pre-mRNA) splicing plays a pivotal role in the flow of
genetic information from DNA to proteins by expanding the coding capacity of genomes …

[HTML][HTML] Distinct regulatory functions and biological roles of lncRNA splice variants

MR Khan, M Avino, RJ Wellinger, B Laurent - Molecular Therapy-Nucleic …, 2023 - cell.com
Alternative splicing (AS) of RNA molecules is a key contributor to transcriptome diversity. In
humans, 90%–95% of multi-exon genes produce alternatively spliced RNA transcripts …

RNA structures in alternative splicing and back‐splicing

B Xu, Y Meng, Y Jin - Wiley Interdisciplinary Reviews: RNA, 2021 - Wiley Online Library
Alternative splicing greatly expands the transcriptomic and proteomic diversities related to
physiological and developmental processes in higher eukaryotes. Splicing of long …

A high-throughput screen identifies small molecule modulators of alternative splicing by targeting RNA G-quadruplexes

J Zhang, SE Harvey, C Cheng - Nucleic acids research, 2019 - academic.oup.com
RNA secondary structures have been increasingly recognized to play an important
regulatory role in post-transcriptional gene regulation. We recently showed that RNA G …