H3K9 and H3K14 acetylation co-occur at many gene regulatory elements, while H3K14ac marks a subset of inactive inducible promoters in mouse embryonic stem …

K Karmodiya, AR Krebs, M Oulad-Abdelghani… - BMC genomics, 2012 - Springer
Background Transcription regulation in pluripotent embryonic stem (ES) cells is a complex
process that involves multitude of regulatory layers, one of which is post-translational …

Genome‐wide reduction in H3K9 acetylation during human embryonic stem cell differentiation

J Krejčí, R Uhlířová, G Galiová… - Journal of cellular …, 2009 - Wiley Online Library
Epigenetic marks are important factors regulating the pluripotency and differentiation of
human embryonic stem cells (hESCs). In this study, we analyzed H3K9 acetylation, an …

H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction

GCA Taylor, R Eskeland, B Hekimoglu-Balkan… - Genome …, 2013 - genome.cshlp.org
Compared with histone H3, acetylation of H4 tails has not been well studied, especially in
mammalian cells. Yet, H4K16 acetylation is of particular interest because of its ability to …

Histone h3 lysine 56 acetylation is linked to the core transcriptional network in human embryonic stem cells

W Xie, C Song, NL Young, AS Sperling, F Xu… - Molecular cell, 2009 - cell.com
Lysine 56 acetylation in the helical core of histone H3 opens yeast chromatin and enables
histone gene transcription, DNA replication, and DNA repair and prevents epigenetic …

Pluripotency-related, valproic acid (VPA)-induced genome-wide histone H3 lysine 9 (H3K9) acetylation patterns in embryonic stem cells

H Hezroni, BS Sailaja, E Meshorer - Journal of Biological Chemistry, 2011 - ASBMB
Embryonic stem cell (ESC) chromatin is characterized by a unique set of histone
modifications, including enrichment for H3 lysine 9 acetylation (H3K9ac). Recent studies …

Histone H3K27 acetylation is dispensable for enhancer activity in mouse embryonic stem cells

T Zhang, Z Zhang, Q Dong, J Xiong, B Zhu - Genome biology, 2020 - Springer
H3K27ac is well recognized as a marker for active enhancers and a great indicator of
enhancer activity. However, its functional impact on transcription has not been …

Dual roles of histone H3 lysine 9 acetylation in human embryonic stem cell pluripotency and neural differentiation

Y Qiao, R Wang, X Yang, K Tang, N Jing - Journal of Biological Chemistry, 2015 - ASBMB
Early neurodevelopment requires cell fate commitment from pluripotent stem cells to
restricted neural lineages, which involves the epigenetic regulation of chromatin structure …

Dynamics of histone acetylation during human early embryogenesis

K Wu, D Fan, H Zhao, Z Liu, Z Hou, W Tao, G Yu… - Cell Discovery, 2023 - nature.com
It remains poorly understood about the regulation of gene and transposon transcription
during human early embryogenesis. Here, we report that broad H3K27ac domains are …

Histone deacetylase inhibition accelerates the early events of stem cell differentiation: transcriptomic and epigenetic analysis

E Karantzali, H Schulz, O Hummel, N Hubner… - Genome biology, 2008 - Springer
Background Epigenetic mechanisms regulate gene expression patterns affecting cell
function and differentiation. In this report, we examine the role of histone acetylation in gene …

Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells

G Pan, S Tian, J Nie, C Yang, V Ruotti, H Wei… - Cell stem cell, 2007 - cell.com
We mapped Polycomb-associated H3K27 trimethylation (H3K27me3) and Trithorax-
associated H3K4 trimethylation (H3K4me3) across the whole genome in human embryonic …