PRSice-2: Polygenic Risk Score software for biobank-scale data

SW Choi, PF O'Reilly - Gigascience, 2019 - academic.oup.com
Background Polygenic risk score (PRS) analyses have become an integral part of
biomedical research, exploited to gain insights into shared aetiology among traits, to control …

[HTML][HTML] Polygenic risk scores in psychiatry: Will they be useful for clinicians?

JM Fullerton, JI Nurnberger - F1000Research, 2019 - ncbi.nlm.nih.gov
Major psychiatric disorders are heritable but they are genetically complex. This means that,
with certain exceptions, single gene markers will not be helpful for diagnosis. However, we …

Generalizing polygenic risk scores from Europeans to Hispanics/Latinos

KE Grinde, Q Qi, TA Thornton, S Liu… - Genetic …, 2019 - Wiley Online Library
Polygenic risk scores (PRSs) are weighted sums of risk allele counts of single‐nucleotide
polymorphisms (SNPs) associated with a disease or trait. PRSs are typically constructed …

Leveraging fine-mapping and multipopulation training data to improve cross-population polygenic risk scores

O Weissbrod, M Kanai, H Shi, S Gazal, WJ Peyrot… - Nature Genetics, 2022 - nature.com
Polygenic risk scores suffer reduced accuracy in non-European populations, exacerbating
health disparities. We propose PolyPred, a method that improves cross-population …

[HTML][HTML] Significant sparse polygenic risk scores across 813 traits in UK Biobank

Y Tanigawa, J Qian, G Venkataraman… - PLoS …, 2022 - journals.plos.org
We present a systematic assessment of polygenic risk score (PRS) prediction across more
than 1,500 traits using genetic and phenotype data in the UK Biobank. We report 813 sparse …

Variable prediction accuracy of polygenic scores within an ancestry group

H Mostafavi, A Harpak, I Agarwal, D Conley… - elife, 2020 - elifesciences.org
Fields as diverse as human genetics and sociology are increasingly using polygenic scores
based on genome-wide association studies (GWAS) for phenotypic prediction. However …