Systems biology approaches for advancing the discovery of effective drug combinations

KA Ryall, AC Tan - Journal of cheminformatics, 2015 - Springer
Complex diseases like cancer are regulated by large, interconnected networks with many
pathways affecting cell proliferation, invasion, and drug resistance. However, current cancer …

Systematic synergy modeling: understanding drug synergy from a systems biology perspective

D Chen, X Liu, Y Yang, H Yang, P Lu - BMC systems biology, 2015 - Springer
Owing to drug synergy effects, drug combinations have become a new trend in combating
complex diseases like cancer, HIV and cardiovascular diseases. However, conventional …

Quantifying drug combination synergy along potency and efficacy axes

CT Meyer, DJ Wooten, BB Paudel, J Bauer… - Cell systems, 2019 - cell.com
Two goals motivate treating diseases with drug combinations: reduce off-target toxicity by
minimizing doses (synergistic potency) and improve outcomes by escalating effect …

High-throughput methods for combinatorial drug discovery

X Sun, S Vilar, NP Tatonetti - Science translational medicine, 2013 - science.org
A more nuanced approach to drug design is to use multiple drugs in combination to target
interacting or complementary pathways. Drug combination treatments have shown higher …

[HTML][HTML] DCDB 2.0: a major update of the drug combination database

Y Liu, Q Wei, G Yu, W Gai, Y Li, X Chen - Database, 2014 - academic.oup.com
Experience in clinical practice and research in systems pharmacology suggested the
limitations of the current one-drug-one-target paradigm in new drug discovery. Single-target …

Polypharmacology in precision oncology: current applications and future prospects

AA Antolin, P Workman, J Mestres… - Current …, 2016 - ingentaconnect.com
Over the past decade, a more comprehensive, large-scale approach to studying cancer
genetics and biology has revealed the challenges of tumor heterogeneity, adaption …

[HTML][HTML] Systems approaches to polypharmacology and drug discovery

ADW Boran, R Iyengar - Current opinion in drug discovery & …, 2010 - ncbi.nlm.nih.gov
Abstract Systems biology uses experimental and computational approaches to characterize
large sample populations systematically, process large datasets, examine and analyze …

Systems biology and systems chemistry: new directions for drug discovery

JB Brown, Y Okuno - Chemistry & biology, 2012 - cell.com
Improvements in drug design have historically been centered around structure-based
optimization of molecule specificity for a targeted protein, in an effort to reduce unintentional …

Integrating systems biology sources illuminates drug action

A Gottlieb, RB Altman - Clinical Pharmacology & Therapeutics, 2014 - Wiley Online Library
There are significant gaps in our understanding of the pathways by which drugs act. This
incomplete knowledge limits our ability to use mechanistic molecular information rationally …

Systems pharmacology

ADW Boran, R Iyengar - Mount Sinai Journal of Medicine: A …, 2010 - Wiley Online Library
We examine how physiology and pathophysiology are studied from a systems perspective,
using high‐throughput experiments and computational analysis of regulatory networks. We …