[HTML][HTML] Novel algorithms for accurate DNA base-calling

OG Mohammed, KT Assaleh, GA Husseini… - Journal of Biomedical …, 2013 - scirp.org
The ability to decipher the genetic code of different species would lead to significant future
scientific achievements in important areas, including medicine and agriculture. The …

DNA base-calling using polynomial classifiers

OG Mohammed, KT Assaleh… - … Joint Conference on …, 2010 - ieeexplore.ieee.org
Base-calling is one of many problems that can be solved using pattern recognition, the act of
classifying raw data based on prior or statistical information extracted from the data into …

DNA base-calling using artificial neural networks

OGM Khan, KT Assaleh, GA Husseini… - 2011 1st Middle East …, 2011 - ieeexplore.ieee.org
Information acquired from any species genomic sequence is expected to contribute
massively to advances in various fields, such as medicine, forensics and agriculture. This …

[PDF][PDF] DNA sequences base calling by PHRED: Error pattern analysis

F Prosdocimi¹, FC Peixoto, JM Ortega - 2003 - researchgate.net
PHRED is the most frequently used base caller algorithm in genome projects. An interesting
point on PHRED utilization is the fact that a low score on some base may not actually …

[HTML][HTML] Statistical learning formulation of the DNA base-calling problem and its solution in a Bayesian EM framework

MS Pereira, L Andrade, S El Difrawy, BL Karger… - Discrete Applied …, 2000 - Elsevier
A novel formulation of the important DNA sequence base-calling problem as well as
algorithms for its solution are introduced. The proposed approach is to bring DNA base …

A maximum-likelihood base caller for DNA sequencing

D Brady, M Kocic, AW Miller… - IEEE transactions on …, 2000 - ieeexplore.ieee.org
The procedures used to sequence the human genome involve the electrophoretic
separation of mixtures of dioxyribonucleic acid (DNA) fragments tagged with reporting …

Unravelling the Complexities of Genetic Codes Through Advanced Machine Learning Algorithms for DNA Sequencing and Analysis

S Gowroju, M Kumar, S Vats… - Genomics at the …, 2025 - Wiley Online Library
DNA sequencing is essential to contemporary research. It enables the advancement of
genetics, meta‐genetics, and phylogenetics, among many other fields. DNA strands must be …

[PDF][PDF] Application of machine learning techniques to perform base-calling in next-generation DNA sequencing

E Tegfalk - 2020 - diva-portal.org
This thesis project is performed in the field of biomedical data analysis and DNA
sequencing, with the aim to study next-generation sequencing technologies, and to …

A comparative analysis of the evolution of dna sequencing techniques along with the accuracy prediction of a sample dna sequence dataset using machine learning

KB Mohammed, SV Boyapati… - … on Paradigm Shifts …, 2023 - ieeexplore.ieee.org
DNA is widely considered the blueprint of life. The instructions required for all life forms, to
evolve, breed, and thrive are found in DNA. Deoxyribonucleic acid, more commonly known …

Introduction to next generation sequencing technologies

L Low, MT Tammi - Practical Bioinformatics for Beginners: From Raw …, 2023 - World Scientific
In 1962, James Watson, Francis Crick, and Maurice Wilkins jointly received the Nobel Prize
in Physiology/Medicine for their discoveries of the structure of deoxyribonucleic acid (DNA) …