[HTML][HTML] Global Analysis of Natural Products Biosynthetic Diversity Encoded in Fungal Genomes

S Zhang, G Shi, X Xu, X Guo, S Li, Z Li, Q Wu… - Journal of …, 2024 - pmc.ncbi.nlm.nih.gov
Fungal secondary metabolites (SMs) represent an invaluable source of therapeutic drugs.
Genomics-based approaches to SM discovery have revealed a vast and largely untapped …

Comprehensive curation and analysis of fungal biosynthetic gene clusters of published natural products

YF Li, KJS Tsai, CJB Harvey, JJ Li, BE Ary… - Fungal Genetics and …, 2016 - Elsevier
Microorganisms produce a wide range of natural products (NPs) with clinically and
agriculturally relevant biological activities. In bacteria and fungi, genes encoding successive …

An interpreted atlas of biosynthetic gene clusters from 1,000 fungal genomes

MT Robey, LK Caesar, MT Drott… - Proceedings of the …, 2021 - National Acad Sciences
Fungi are prolific producers of natural products, compounds which have had a large societal
impact as pharmaceuticals, mycotoxins, and agrochemicals. Despite the availability of over …

Strategies for natural product discovery by unlocking cryptic biosynthetic gene clusters in fungi

JY Hur, E Jeong, YC Kim, SR Lee - Separations, 2023 - mdpi.com
Recent advancements in genome sequencing and bioinformatic analysis of fungal genomes
have revealed that fungi possess cryptic or silent biosynthetic gene clusters (BGCs). This …

Analyzing fungal secondary metabolite genes and gene clusters

YM Chiang, CCC Wang… - Natural Products: Natural …, 2014 - Wiley Online Library
Fungal secondary metabolites (SMs) are currently an important source of medically useful
compounds, and sequencing projects have revealed that fungi have many clusters of genes …

SMURF: genomic mapping of fungal secondary metabolite clusters

N Khaldi, FT Seifuddin, G Turner, D Haft… - Fungal Genetics and …, 2010 - Elsevier
Fungi produce an impressive array of secondary metabolites (SMs) including mycotoxins,
antibiotics and pharmaceuticals. The genes responsible for their biosynthesis, export, and …

Biosynthetic gene clusters and the evolution of fungal chemodiversity

A Rokas, ME Mead, JL Steenwyk, HA Raja… - Natural product …, 2020 - pubs.rsc.org
Covering: up to 2019 Fungi produce a remarkable diversity of secondary metabolites: small,
bioactive molecules not required for growth but which are essential to their ecological …

Next-generation sequencing approach for connecting secondary metabolites to biosynthetic gene clusters in fungi

RA Cacho, Y Tang, YH Chooi - Frontiers in microbiology, 2015 - frontiersin.org
Genomics has revolutionized the research on fungal secondary metabolite (SM)
biosynthesis. To elucidate the molecular and enzymatic mechanisms underlying the …

A scalable platform to identify fungal secondary metabolites and their gene clusters

KD Clevenger, JW Bok, R Ye, GP Miley… - Nature chemical …, 2017 - nature.com
The genomes of filamentous fungi contain up to 90 biosynthetic gene clusters (BGCs)
encoding diverse secondary metabolites—an enormous reservoir of untapped chemical …

Unearthing fungal chemodiversity and prospects for drug discovery

C Greco, NP Keller, A Rokas - Current opinion in microbiology, 2019 - Elsevier
Highlights•Fungi are an excellent source of drugs, and their full potential in producing
different metabolites is still largely untapped.•Several heterologous platforms have been …