Parameter inference for computational cognitive models with approximate Bayesian computation

A Kangasrääsiö, JPP Jokinen, A Oulasvirta… - Cognitive …, 2019 - Wiley Online Library
This paper addresses a common challenge with computational cognitive models: identifying
parameter values that are both theoretically plausible and generate predictions that match …

Flexible statistical inference for mechanistic models of neural dynamics

JM Lueckmann, PJ Goncalves… - Advances in neural …, 2017 - proceedings.neurips.cc
Mechanistic models of single-neuron dynamics have been extensively studied in
computational neuroscience. However, identifying which models can quantitatively …

[HTML][HTML] Hyperbolic trade-off: The importance of balancing trial and subject sample sizes in neuroimaging

G Chen, DS Pine, MA Brotman, AR Smith, RW Cox… - NeuroImage, 2022 - Elsevier
Here we investigate the crucial role of trials in task-based neuroimaging from the
perspectives of statistical efficiency and condition-level generalizability. Big data initiatives …

Towards a cross-level understanding of Bayesian inference in the brain

CHS Lin, MI Garrido - Neuroscience & Biobehavioral Reviews, 2022 - Elsevier
Perception emerges from unconscious probabilistic inference, which guides behaviour in
our ubiquitously uncertain environment. Bayesian decision theory is a prominent …

I tried a bunch of things: the dangers of unexpected overfitting in classification

M Powell, M Hosseini, J Collins, C Callahan-Flintoft… - BioRxiv, 2016 - biorxiv.org
Machine learning is a powerful set of techniques that has enhanced the abilities of
neuroscientists to interpret information collected through EEG, fMRI, and MEG data. With …

[HTML][HTML] In vitro neural networks minimise variational free energy

T Isomura, K Friston - Scientific reports, 2018 - nature.com
In this work, we address the neuronal encoding problem from a Bayesian perspective.
Specifically, we ask whether neuronal responses in an in vitro neuronal network are …

Covariate-powered empirical Bayes estimation

N Ignatiadis, S Wager - Advances in Neural Information …, 2019 - proceedings.neurips.cc
We study methods for simultaneous analysis of many noisy experiments in the presence of
rich covariate information. The goal of the analyst is to optimally estimate the true effect …

Challenges and promises for translating computational tools into clinical practice

WY Ahn, JR Busemeyer - Current Opinion in Behavioral Sciences, 2016 - Elsevier
Highlights•Computational approaches provide novel insights into psychiatric
conditions.•There exist several challenges for translating the approaches into clinical …

The experiment is just as important as the likelihood in understanding the prior: a cautionary note on robust cognitive modeling

L Kennedy, D Simpson, A Gelman - Computational Brain & Behavior, 2019 - Springer
Cognitive modeling shares many features with statistical modeling, making it seem trivial to
borrow from the practices of robust Bayesian statistics to protect the practice of robust …

Bayesian just-so stories in psychology and neuroscience.

JS Bowers, CJ Davis - Psychological bulletin, 2012 - psycnet.apa.org
According to Bayesian theories in psychology and neuroscience, minds and brains are
(near) optimal in solving a wide range of tasks. We challenge this view and argue that more …