Genome complexity of harmful microalgae

S Casabianca, L Cornetti, S Capellacci, C Vernesi… - Harmful algae, 2017 - Elsevier
During the past decade, next generation sequencing (NGS) technologies have provided
new insights into the diversity, dynamics, and metabolic pathways of natural microbial …

The state of algal genome quality and diversity

ER Hanschen, SR Starkenburg - Algal Research, 2020 - Elsevier
The genomic era of biology has created unprecedented opportunity to study how life works,
including understanding evolutionary principles, bioprospecting for novel antibiotics, and …

Applications of next-generation sequencing to unravelling the evolutionary history of algae

KM Kim, JH Park, D Bhattacharya… - … journal of systematic …, 2014 - microbiologyresearch.org
First-generation Sanger DNA sequencing revolutionized science over the past three
decades and the current next-generation sequencing (NGS) technology has opened the …

[PDF][PDF] Why we need more algal genomes

D Bhattacharya, H Qiu, DC Price, HS Yoon - Journal of phycology, 2015 - academia.edu
In the current post-genomics world, a relevant question on the minds of many phycologists
might be: do we really need more algal genomes or, should we stop and focus on the hard …

Complete genomes derived by directly sequencing freshwater bloom populations emphasize the significance of the genus level ADA clade within the Nostocales

TW Dreher, EW Davis II, RS Mueller - Harmful Algae, 2021 - Elsevier
The genome sequences of 16 Nostocales cyanobacteria have been determined. Most of
them are complete or near-complete genome sequences derived by long-read metagenome …

Advances of high-throughput sequencing for unraveling biotechnological potential of microalgal-bacterial communities

PA Zaytsev, VA Rodin, AA Zaytseva, MI Zvereva… - Journal of Applied …, 2024 - Springer
Although established biotechnological applications of microalgae eg, the production of high-
value metabolites is based on axenic cultures, exploitation of the mutualistic consortia of …

Omics analysis for dinoflagellates biology research

Y Bi, F Wang, W Zhang - Microorganisms, 2019 - mdpi.com
Dinoflagellates are important primary producers for marine ecosystems and are also
responsible for certain essential components in human foods. However, they are also …

Environmental and evolutionary genomics of microbial algae: power and challenges of metagenomics

E Toulza, R Blanc-Mathieu, S Gourbiere… - Advances in Botanical …, 2012 - Elsevier
Metagenomics is the study of the DNA content of a community of microorganisms. With the
advent of next-generation sequencing technologies, more and more metagenomes from …

Genomic copy number variability at the genus, species and population levels impacts in situ ecological analyses of dinoflagellates and harmful algal blooms

R Ruvindy, A Barua, CJS Bolch, C Sarowar… - ISME …, 2023 - academic.oup.com
The application of meta-barcoding, qPCR, and metagenomics to aquatic eukaryotic
microbial communities requires knowledge of genomic copy number variability (CNV). CNV …

Developing model systems for dinoflagellates in the post‐genomic era

H Ishida, U John, SA Murray… - Journal of …, 2023 - Wiley Online Library
Dinoflagellates are a diverse group of eukaryotic microbes that are ubiquitous in aquatic
environments. Largely photosynthetic, they encompass symbiotic, parasitic, and free‐living …