[HTML][HTML] Neuro4Neuro: a neural network approach for neural tract segmentation using large-scale population-based diffusion imaging

B Li, M De Groot, RME Steketee, R Meijboom, M Smits… - Neuroimage, 2020 - Elsevier
Subtle changes in white matter (WM) microstructure have been associated with normal
aging and neurodegeneration. To study these associations in more detail, it is highly …

Reproducible white matter tract segmentation using 3D U-Net on a large-scale DTI dataset

B Li, M de Groot, MW Vernooij, MA Ikram… - Machine Learning in …, 2018 - Springer
Tract-specific diffusion measures, as derived from brain diffusion MRI, have been linked to
white matter tract structural integrity and neurodegeneration. As a consequence, there is a …

Learning white matter subject‐specific segmentation from structural MRI

Q Yang, CB Hansen, LY Cai, F Rheault… - Medical …, 2022 - Wiley Online Library
Purpose Mapping brain white matter (WM) is essential for building an understanding of brain
anatomy and function. Tractography‐based methods derived from diffusion‐weighted MRI …

[HTML][HTML] Volumetric segmentation of white matter tracts with label embedding

W Liu, Q Lu, Z Zhuo, Y Li, Y Duan, P Yu, L Qu, C Ye… - Neuroimage, 2022 - Elsevier
Convolutional neural networks have achieved state-of-the-art performance for white matter
(WM) tract segmentation based on diffusion magnetic resonance imaging (dMRI). However …

Tract shape modelling provides evidence of topological change in corpus callosum genu during normal ageing

ME Bastin, JP Piatkowski, AJ Storkey, LJ Brown… - Neuroimage, 2008 - Elsevier
Understanding how ageing affects brain structure is an important challenge for medical
science. By allowing segmentation of fasciculi-of-interest from diffusion magnetic resonance …

[HTML][HTML] TractSeg-Fast and accurate white matter tract segmentation

J Wasserthal, P Neher, KH Maier-Hein - NeuroImage, 2018 - Elsevier
The individual course of white matter fiber tracts is an important factor for analysis of white
matter characteristics in healthy and diseased brains. Diffusion-weighted MRI tractography …

Deep white matter analysis (DeepWMA): fast and consistent tractography segmentation

F Zhang, SC Karayumak, N Hoffmann, Y Rathi… - Medical Image …, 2020 - Elsevier
White matter tract segmentation, ie identifying tractography fibers (streamline trajectories)
belonging to anatomically meaningful fiber tracts, is an essential step to enable tract …

Cntseg: A multimodal deep-learning-based network for cranial nerves tract segmentation

L Xie, J Huang, J Yu, Q Zeng, Q Hu, Z Chen, G Xie… - Medical Image …, 2023 - Elsevier
The segmentation of cranial nerves (CNs) tracts based on diffusion magnetic resonance
imaging (dMRI) provides a valuable quantitative tool for the analysis of the morphology and …

Differential development of human brain white matter tracts

D Imperati, S Colcombe, C Kelly, A Di Martino, J Zhou… - PloS one, 2011 - journals.plos.org
Neuroscience is increasingly focusing on developmental factors related to human structural
and functional connectivity. Unfortunately, to date, diffusion-based imaging approaches …

Deep white matter analysis: fast, consistent tractography segmentation across populations and dMRI acquisitions

F Zhang, N Hoffmann, SC Karayumak, Y Rathi… - … Conference on Medical …, 2019 - Springer
We present a deep learning tractography segmentation method that allows fast and
consistent white matter fiber tract identification across healthy and disease populations and …