Using machine learning to predict suitable conditions for organic reactions

H Gao, TJ Struble, CW Coley, Y Wang… - ACS central …, 2018 - ACS Publications
Reaction condition recommendation is an essential element for the realization of computer-
assisted synthetic planning. Accurate suggestions of reaction conditions are required for …

Learning to predict chemical reactions

MA Kayala, CA Azencott, JH Chen… - Journal of chemical …, 2011 - ACS Publications
Being able to predict the course of arbitrary chemical reactions is essential to the theory and
applications of organic chemistry. Approaches to the reaction prediction problems can be …

Organic reactivity from mechanism to machine learning

K Jorner, A Tomberg, C Bauer, C Sköld… - Nature Reviews …, 2021 - nature.com
As more data are introduced in the building of models of chemical reactivity, the mechanistic
component can be reduced until 'big data'applications are reached. These methods no …

Dataset design for building models of chemical reactivity

P Raghavan, BC Haas, ME Ruos, J Schleinitz… - ACS Central …, 2023 - ACS Publications
Models can codify our understanding of chemical reactivity and serve a useful purpose in
the development of new synthetic processes via, for example, evaluating hypothetical …

Data augmentation and pretraining for template-based retrosynthetic prediction in computer-aided synthesis planning

ME Fortunato, CW Coley, BC Barnes… - Journal of chemical …, 2020 - ACS Publications
This work presents efforts to augment the performance of data-driven machine learning
algorithms for reaction template recommendation used in computer-aided synthesis …

Prediction of organic reaction outcomes using machine learning

CW Coley, R Barzilay, TS Jaakkola, WH Green… - ACS central …, 2017 - ACS Publications
Computer assistance in synthesis design has existed for over 40 years, yet retrosynthesis
planning software has struggled to achieve widespread adoption. One critical challenge in …

[HTML][HTML] Predictive chemistry: machine learning for reaction deployment, reaction development, and reaction discovery

Z Tu, T Stuyver, CW Coley - Chemical science, 2023 - pubs.rsc.org
The field of predictive chemistry relates to the development of models able to describe how
molecules interact and react. It encompasses the long-standing task of computer-aided …

Machine learning in computer-aided synthesis planning

CW Coley, WH Green, KF Jensen - Accounts of chemical …, 2018 - ACS Publications
Conspectus Computer-aided synthesis planning (CASP) is focused on the goal of
accelerating the process by which chemists decide how to synthesize small molecule …

Combining machine learning and computational chemistry for predictive insights into chemical systems

JA Keith, V Vassilev-Galindo, B Cheng… - Chemical …, 2021 - ACS Publications
Machine learning models are poised to make a transformative impact on chemical sciences
by dramatically accelerating computational algorithms and amplifying insights available from …

[HTML][HTML] Quantitative interpretation explains machine learning models for chemical reaction prediction and uncovers bias

DP Kovács, W McCorkindale, AA Lee - Nature communications, 2021 - nature.com
Organic synthesis remains a major challenge in drug discovery. Although a plethora of
machine learning models have been proposed as solutions in the literature, they suffer from …