Identification of small exonic CNV from whole-exome sequence data and application to autism spectrum disorder

CS Poultney, AP Goldberg, E Drapeau, Y Kou… - The American Journal of …, 2013 - cell.com
Copy number variation (CNV) is an important determinant of human diversity and plays
important roles in susceptibility to disease. Most studies of CNV carried out to date have …

Transmission disequilibrium of small CNVs in simplex autism

N Krumm, BJ O'Roak, E Karakoc, K Mohajeri… - The American Journal of …, 2013 - cell.com
We searched for disruptive, genic rare copy-number variants (CNVs) among 411 families
affected by sporadic autism spectrum disorder (ASD) from the Simons Simplex Collection by …

Genome-wide transcriptome profiling reveals the functional impact of rare de novo and recurrent CNVs in autism spectrum disorders

R Luo, SJ Sanders, Y Tian, I Voineagu, N Huang… - The American Journal of …, 2012 - cell.com
Copy-number variants (CNVs) are a major contributor to the pathophysiology of autism
spectrum disorders (ASDs), but the functional impact of CNVs remains largely unexplored …

De novo rates and selection of large copy number variation

A Itsara, H Wu, JD Smith, DA Nickerson… - Genome …, 2010 - genome.cshlp.org
While copy number variation (CNV) is an active area of research, de novo mutation rates
within human populations are not well characterized. By focusing on large (> 100 kbp) …

[HTML][HTML] A comprehensive workflow for read depth-based identification of copy-number variation from whole-genome sequence data

B Trost, S Walker, Z Wang… - The American Journal of …, 2018 - cell.com
A remaining hurdle to whole-genome sequencing (WGS) becoming a first-tier genetic test
has been accurate detection of copy-number variations (CNVs). Here, we used several …

Reduced transcript expression of genes affected by inherited and de novo CNVs in autism

AS Nord, W Roeb, DE Dickel, T Walsh… - European Journal of …, 2011 - nature.com
Individuals with autism are more likely to carry rare inherited and de novo copy number
variants (CNVs). However, further research is needed to establish which CNVs are causal …

Global increases in both common and rare copy number load associated with autism

S Girirajan, RL Johnson, F Tassone… - Human molecular …, 2013 - academic.oup.com
Children with autism have an elevated frequency of large, rare copy number variants
(CNVs). However, the global load of deletions or duplications, per se, and their size, location …

A discovery resource of rare copy number variations in individuals with autism spectrum disorder

A Prasad, D Merico… - G3: Genes …, 2012 - academic.oup.com
The identification of rare inherited and de novo copy number variations (CNVs) in human
subjects has proven a productive approach to highlight risk genes for autism spectrum …

Large mosaic copy number variations confer autism risk

MA Sherman, RE Rodin, G Genovese, C Dias… - Nature …, 2021 - nature.com
Although germline de novo copy number variants (CNVs) are known causes of autism
spectrum disorder (ASD), the contribution of mosaic (early-developmental) copy number …

Detection of clinically relevant copy number variants with whole‐exome sequencing

J de Ligt, PM Boone, R Pfundt, LELM Vissers… - Human …, 2013 - Wiley Online Library
Copy number variation (CNV) is a common source of genetic variation that has been
implicated in many genomic disorders. This has resulted in the widespread application of …