Drug repurposing for coronavirus (SARS-CoV-2) based on gene co-expression network analysis

H MotieGhader, E Safavi, A Rezapour, FF Amoodizaj… - Scientific reports, 2021 - nature.com
Severe acute respiratory syndrome (SARS) is a highly contagious viral respiratory illness.
This illness is spurred on by a coronavirus known as SARS-associated coronavirus (SARS …

MCCS: a novel recognition pattern-based method for fast track discovery of anti-SARS-CoV-2 drugs

Z Feng, M Chen, Y Xue, T Liang, H Chen… - Briefings in …, 2021 - academic.oup.com
Given the scale and rapid spread of the coronavirus disease 2019 (COVID-19) caused by
severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2, or 2019-nCoV), there is an …

Network neighbors of viral targets and differentially expressed genes in COVID-19 are drug target candidates

C Zambrana, A Xenos, R Böttcher, N Malod-Dognin… - Scientific reports, 2021 - nature.com
The COVID-19 pandemic is raging. It revealed the importance of rapid scientific
advancement towards understanding and treating new diseases. To address this challenge …

Machine learning–based integration of network features and chemical structure of compounds for SARS‐CoV‐2 drug effect analysis

J Späth, RS Wang, M Humphrey… - CPT …, 2024 - Wiley Online Library
High drug development costs and the limited number of new annual drug approvals
increase the need for innovative approaches for drug effect prediction. Severe acute …

Molecular targets and system biology approaches for drug repurposing against SARS-CoV-2

RK Singh, BS Yadav, TM Mohapatra - Bulletin of the National Research …, 2020 - Springer
Background COVID-19, a pandemic declared by WHO, has infected about 39.5 million and
killed about 1.1 million people throughout the world. There is the urgent need of more …

COVID19db: a comprehensive database platform to discover potential drugs and targets of COVID-19 at whole transcriptomic scale

W Zhang, Y Zhang, Z Min, J Mo, Z Ju… - Nucleic acids …, 2022 - academic.oup.com
Many open access transcriptomic data of coronavirus disease 2019 (COVID-19) were
generated, they have great heterogeneity and are difficult to analyze. To utilize these …

Executable network of SARS-CoV-2-host interaction predicts drug combination treatments

R Howell, MA Clarke, AK Reuschl, T Chen… - NPJ Digital …, 2022 - nature.com
The COVID-19 pandemic has pushed healthcare systems globally to a breaking point. The
urgent need for effective and affordable COVID-19 treatments calls for repurposing …

Causal network models of SARS-CoV-2 expression and aging to identify candidates for drug repurposing

A Belyaeva, L Cammarata, A Radhakrishnan… - Nature …, 2021 - nature.com
Given the severity of the SARS-CoV-2 pandemic, a major challenge is to rapidly repurpose
existing approved drugs for clinical interventions. While a number of data-driven and …

Integrative transcriptome analyses empower the anti-COVID-19 drug arsenal

N El-Hachem, E Eid, G Nemer, G Dbaibo, O Abbas… - Iscience, 2020 - cell.com
The beginning of the 21st century has been marked by three distinct waves of zoonotic
coronavirus outbreaks into the human population. The COVID-19 (coronavirus disease …

Identifying potential novel insights for COVID-19 pathogenesis and therapeutics using an integrated bioinformatics analysis of host transcriptome

SA El-Aarag, A Mahmoud, M ElHefnawi - International Journal of Biological …, 2022 - Elsevier
The molecular mechanisms underlying the pathogenesis of COVID-19 have not been fully
discovered. This study aims to decipher potentially hidden parts of the pathogenesis of …